EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-40341

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:42580440-42581690

Target genes

Number: 10
Name	Ensembl ID

RPS19	ENSG00000105372
ATP1A3	ENSG00000105409
GRIK5	ENSG00000105737
ZNF574	ENSG00000105732
CTC	ENSG00000254887
POU2F2	ENSG00000028277
DEDD2	ENSG00000160570
ZNF526	ENSG00000167625
ERF	ENSG00000105722
PAFAH1B3	ENSG00000079462

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F6	MA0471.1	chr19:42580700-42580711	GGGCGGGAAGG	+	6.62
KLF5	MA0599.1	chr19:42580663-42580673	GGGGCGGGGC	-	6.02
RREB1	MA0073.1	chr19:42581559-42581579	TGGGTTAGGGTGGGTTGGGT	-	6.38
Zfx	MA0146.2	chr19:42580483-42580497	GCCGCCGCGGCCTC	+	6.27

Enhancer Sequence

GAGCGCGAGC GGGCGCGCAG AGGCCGGCCG GGCTGCGCTC CCTGCCGCCG CGGCCTCCTC 60
TTGCCAGGTC GCCTGCGCAC TGAGGGCCTG AGGGGGTGCG CGCCGGGCAG TTAGGGCGGA 120
GCGGCACCAA CGGCCGACCC GGCGCGCGGG CAGCCGGGCG GGGGCCGGGC TGGAGCGGCG 180
GGTGGGGAAG GGGCCTGGAG TCGCGTGCGG GGCTGAGTGA GGAGGGGCGG GGCTCGGGCT 240
GAGGCTTTGG TGGGGCACCT GGGCGGGAAG GGGAGGCCTC AGAGCTGTCC CAAGAGGGCT 300
CCGCGGCTCC CCAGGGTTTG GGGTAAAGGA CTTGGTGGTG TGGCAAGTCC AGGACGAAGG 360
GGCTGGGCCG GTTAGACGGC ACGTGGGTGC CCAGTTAGGG GCTTAGGGCG TGAGAAAGAT 420
AATTAAGTTA ATGCAGGGGA AAAATATCTA GTTCTTCCTG GAAAGAATTG GGGCGGTGAG 480
AGGGGTTTTG GTGTGAAGAC ATTAGGAAAT CGATATCCCC AAGGGAACGG TTTAGAGCTA 540
AGGAGGGGTC CAGTTGTAAT GGATGGGGTT AAATTAATGT GAAGAGGCCT TAAACCAATG 600
TGTCAGGAGG TTGGGTACCC TTGGAATGCG TGGAAAGGAG TCTTTGTACA AAGAAGGATT 660
AAGTGTATTT TAAAAGGGTG TCTGGGTGTC CCTAGAATGA GCTGGGGAAG GTAGTCTTTT 720
TTAAGTACAG GTAATTAGGC CAAGGTGAAG ATGGGATTTG GTTATTGGAA GGGGAGGAAG 780
TAGGGTGGGA GAGATCTGTG TGCTAAAGTG AGGGGTGCCT GGGAATTCCT GGAATGAGAC 840
TGAGAGGTTG CTAAGACGCT GGGGGGTCTG AGTACCCCCA GAATAGGAGG CTGGTGAGAG 900
GGGCTTGAGT GTGAGGAAGA GGGGTCTGTG CTGGATTAAG GTGGTGATGG AGGTTCTGTA 960
TGAGAATAGG AGGTCCGGGT ATCCCTAAAG GGGGTTTGGG CAGCACGAGG GGTGTGTGTA 1020
AAAGGAGCTT AAGCCATTGT GAAAGATGGG TGTGTGGATC TTTACACAAA GAAGAGGAGT 1080
TATGTTGCTA CGAAGAGGAG GGTCTGAGCA TCCCTAGAAT GGGTTAGGGT GGGTTGGGTC 1140
TTCTAGCAAA TTAAAAAAGA TTAGGTTAAT AATGTGGAGG AGGATCTGGA TATTCCTGAG 1200
ATGGATTTGA GGGGGGGCTC TGTTTGCAAG AGAGGCATAG GTTGATATAA 1250