Tag | Content |
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EnhancerAtlas ID | HS105-40298 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:41826810-41828490 |
Target genes | Number: 13 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
TFAP2C | MA0524.2 | chr19:41827779-41827791 | TGCCTTAGGGCA | + | 6.04 | TFAP2C | MA0524.2 | chr19:41827779-41827791 | TGCCTTAGGGCA | - | 6.32 |
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| Number of super-enhancer constituents: 26 | ID | Coordinate | Tissue/cell |
SE_01266 | chr19:41827473-41832460 | Adrenal_Gland | SE_01941 | chr19:41826114-41834937 | Aorta | SE_02341 | chr19:41827299-41835217 | Astrocytes | SE_06609 | chr19:41827940-41835020 | Brain_Hippocampus_Middle | SE_10928 | chr19:41826548-41839191 | CD20 | SE_13335 | chr19:41827590-41831869 | CD34_Primary_RO01536 | SE_14717 | chr19:41828274-41835424 | CD4_Memory_Primary_7pool | SE_20013 | chr19:41827344-41835576 | CD56 | SE_20919 | chr19:41828272-41831918 | CD8_Memory_7pool | SE_22408 | chr19:41827603-41828479 | CD8_primiary | SE_26210 | chr19:41827478-41831409 | Duodenum_Smooth_Muscle | SE_27131 | chr19:41827046-41832712 | Esophagus | SE_31885 | chr19:41826804-41832672 | Gastric | SE_37091 | chr19:41826651-41835398 | HSMMtube | SE_38093 | chr19:41826925-41835502 | HUVEC | SE_40475 | chr19:41828286-41832867 | K562 | SE_41125 | chr19:41824878-41835177 | Left_Ventricle | SE_44313 | chr19:41826974-41833634 | NHDF-Ad | SE_44950 | chr19:41827136-41832669 | NHLF | SE_45824 | chr19:41826675-41835471 | Osteoblasts | SE_48776 | chr19:41825187-41832669 | Right_Atrium | SE_50262 | chr19:41826769-41835431 | Sigmoid_Colon | SE_52575 | chr19:41827074-41832699 | Small_Intestine | SE_54849 | chr19:41827115-41832913 | Stomach_Smooth_Muscle | SE_62666 | chr19:41801738-41841748 | Tonsil | SE_65513 | chr19:41827124-41830643 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr19 | 41826836 | 41827141 | chr19 | 41827649 | 41828097 |
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| Number: 2 | ID | Chromosome | Start | End |
GH19I041319 | chr19 | 41825798 | 41826814 | GH19I041321 | chr19 | 41827009 | 41835422 |
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Enhancer Sequence | CAGTTGTTCA TTTCTCCAGT AGCACCCCAG GGCTGAGACA CGTGGGCCAC CTGCTTTGGA 60 AAAGGACCCA GGAGAGTGAT GTGTCAGTCA AAGATTGGTT TTGTCATTTA AGGTAGCTTT 120 GCCTTGTGGT CCCAAACACT GGGCCCAGCA GCAGAGGACC CTCCTTGGTT TCACATCCAG 180 CCCCGATGAC ATGTGAAATG TGTGACCACA CATAAGCGGA CCCTACGTCC GTCCTGAGGT 240 GGGCTCATCA GGAAAGTGGG AATTGTGATT GCCCCTGCCG TGGGGCCCAG CCATGGTCAC 300 CAGAGCCTCC TCCCATTCTG GGATCCCTGG CTCTTGAATG GAATCTGGCT GCTCCACTTC 360 CAGCCAGGCA GGCCTGCTCA GAGCCCCAGT TCCTGCACGC AAAGTGGTGA GCAGAGGGCC 420 TGGACCATGG GGACCCTCAT TCAGCAGGCA TCACTGCTGT TCCCAAGCCA GGGCCCAGGA 480 GGAAATTGGG GGTGGCAGGG ACCACAGTGT GTTGCCTCGG GAGGGCAGCA GTGGCCCCGA 540 CGTGTCCCCC ATCCGTGCAT TCAGTTGGCA TGTGCTGAGC ATCTGTGATG TCCACAGGCT 600 CTGGGGATAA GGCGGGGACC AAAACCAACG AAAGGCTTCC CTGCCTGAAA AGGGGTCCCA 660 CTCTAGTGAG GAAGATCTAG AATTTTCTAG CACTTCATGG TGATGGGGCC ATGAGGAAAA 720 GTGAAGCAGT GGGAGGGGAG TGACAGGGTG GCTAGGGAAG GCCTCTCTGA GGGGCTGACA 780 GCAAAGGCCT GCAGGAAGTG GGAGGAGCAT TCCTGGCAGA GGCCATAGTA GGTGCCAGAG 840 CCCCCAGCAG CACCAAGGGG CAGAAGGGGC TGGAGCAGTC GCAAGGGGTC GCAAGGGGGT 900 AGGAGATCTC TGAGTGGCCA AATCAAGCTA GGCTTGGCAA CCCAAGTGCG TGCTGCTGGG 960 TTTACTTGCT GCCTTAGGGC ATGGGCAGCT GTCCTGCCTG TGGTCAGCTC TGGCTAATCC 1020 CGGCCTCTAT CCACTGGAGG GCAGTAGCAA GCCCCCAGTG ATGACGTCAA AATGTCAAAA 1080 TGCCGTGGGG GCAAAATTAC CCCCAAGTGG TTCTTTGTTG AGAGCCACTG CCTGCTTGAG 1140 AATGTAAGCC CATGTGTCGC CACATTTTAC AGCTTTTTAA GAAAAACTAG AGCTTTGGGG 1200 TTTTTTTTAG ACAGGGTCTC CTTTGTCACC CAGGCTGGAA TGTGGTGGTT TGATCATAGC 1260 TCACCGCAGC CTTGACCTCC TGGCCTGAAG TGAGCCTCCC GCCTCAGCCA ACTGAGTAAG 1320 CTGGGACTAC AGGTGCTCAC CACCACGCCT GGCTACTTTT TCAATTTTTT TGTAGAGACA 1380 GGGTCTCCCT TTGTTGCCCA GGGCTCCAAC TGCTGGGCTC AAGCCATCTT CCTGCCTTGG 1440 CCTCCCATAG TGCTGGGATT GCAGGCATGA GCCACCATGC CCAGCCCAGA GTTTTTGTGC 1500 AAACTCTGAT TTGGAAAATG TTCCCTTGAG TTTTAAACCC TGAGAGTTTT AAACACTATC 1560 TCCCTTGGGA GGGTCAGCTC TGACGGCTGC CAGCACATGG CCTTTGACAT CAGGGTGCCC 1620 CAGGCCTTTG ACCTGGGCAT CCGAGGGTCC CAGGGAGACC CAGTCCTTGA CAGCCTCCTC 1680
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