EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-40179

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:39926350-39926480

Target genes

Number: 18
Name	Ensembl ID

ECH1	ENSG00000104823
MRPS12	ENSG00000128626
PAK4	ENSG00000130669
LRFN1	ENSG00000128011
GMFG	ENSG00000130755
SAMD4B	ENSG00000179134
AC005239.1	ENSG00000241983
PAF1	ENSG00000006712
MED29	ENSG00000063322
ZFP36	ENSG00000128016
PLEKHG2	ENSG00000090924
RPS16	ENSG00000105193
SUPT5H	ENSG00000196235
TIMM50	ENSG00000105197
DLL3	ENSG00000090932
EID2B	ENSG00000176401
EID2	ENSG00000176396
FBL	ENSG00000105202

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263

MA0528.1

chr19:39926444-39926465

GCCTTCTCCTTCCCCTCCCCT

6.11

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_15085	chr19:39924379-39927798	CD4_Memory_Primary_7pool
SE_19859	chr19:39923972-39927696	CD4p_CD25-_Il17p_PMAstim_Th17
SE_35161	chr19:39920551-39927873	HeLa
SE_38790	chr19:39920552-39927438	HUVEC
SE_45427	chr19:39924559-39927474	NHLF
SE_47107	chr19:39910686-39946248	Panc1
SE_56770	chr19:39925877-39926719	VACO_400

Enhancer Sequence

GTAAGATACA AGAGAAACAG GGGCCCCGTG AGCTCCGGCT CCAGCTCCCA TGTTACCCCC 60
TAGATTCCTG CCCACCGACC TCTCCCAGAC CCTGGCCTTC TCCTTCCCCT CCCCTTCCCA 120
TCCGGCGTCT 130