| Tag | Content |
|---|
EnhancerAtlas ID | HS105-40099 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:39127600-39128080 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr19:39127631-39127650 | TGCCCACCAGAGGGAGCTC | + | 6.36 | | RREB1 | MA0073.1 | chr19:39127697-39127717 | CCCCACCACACCACACCCCA | + | 6.83 | | ZNF263 | MA0528.1 | chr19:39127730-39127751 | GCCTCCTTTTTCCCCTGCTTC | - | 6.03 |
|
| | Number of super-enhancer constituents: 31 | ID | Coordinate | Tissue/cell |
| SE_00117 | chr19:39126719-39127932 | Adipose_Nuclei | | SE_07777 | chr19:39124999-39128150 | Brain_Inferior_Temporal_Lobe | | SE_09404 | chr19:39127026-39128392 | CD14 | | SE_14624 | chr19:39125409-39128000 | CD4_Memory_Primary_7pool | | SE_19537 | chr19:39126410-39128305 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20249 | chr19:39125184-39128305 | CD56 | | SE_22709 | chr19:39125315-39128147 | CD8_primiary | | SE_23062 | chr19:39126303-39128540 | Colon_Crypt_1 | | SE_23732 | chr19:39127169-39128050 | Colon_Crypt_2 | | SE_24739 | chr19:39126271-39128151 | Colon_Crypt_3 | | SE_25779 | chr19:39126515-39128552 | Duodenum_Smooth_Muscle | | SE_26525 | chr19:39126294-39128542 | Esophagus | | SE_27614 | chr19:39126129-39128564 | Fetal_Intestine | | SE_28533 | chr19:39125197-39128591 | Fetal_Intestine_Large | | SE_31384 | chr19:39126254-39128532 | Gastric | | SE_34299 | chr19:39127448-39128325 | HCT-116 | | SE_34681 | chr19:39125438-39128519 | HeLa | | SE_35812 | chr19:39126961-39128568 | HMEC | | SE_40018 | chr19:39127676-39128265 | K562 | | SE_40594 | chr19:39125225-39128559 | Left_Ventricle | | SE_42097 | chr19:39126229-39128147 | Lung | | SE_48555 | chr19:39127244-39128081 | Right_Atrium | | SE_50056 | chr19:39125256-39128091 | Sigmoid_Colon | | SE_52339 | chr19:39126291-39128529 | Small_Intestine | | SE_53291 | chr19:39126576-39128320 | Spleen | | SE_56725 | chr19:39126329-39127678 | VACO_400 | | SE_56725 | chr19:39127757-39128565 | VACO_400 | | SE_62811 | chr19:39125155-39186863 | Tonsil | | SE_64225 | chr19:39126864-39127750 | NHEK | | SE_65266 | chr19:39127405-39128267 | Pancreatic_islets | | SE_68725 | chr19:39127316-39128496 | H9 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I038634 | chr19 | 39124861 | 39129751 |
|
Enhancer Sequence | GTCTCCTCCC TGGCTTCCTG CCTCTGCCCC TTGCCCACCA GAGGGAGCTC AGGAGCAGGC 60
CTCTGCTCTG GGTTGGCCCC CGCACCGTAC CCCCAGCCCC CACCACACCA CACCCCATGG 120
CGGGGTTTCC GCCTCCTTTT TCCCCTGCTT CGACTTCCTC CCTTGCCCCA CCCTACCTTC 180
CTGACCTTTT AGGTCTTGGG TGGGGAGGGC AGCATTGAGT CAGCAAGGAG GAGGGAGTAT 240
GAATGGGATG TGGCAGCCCA GCCCTGTGGT GGAGGCTGAG CACCTCTGGG AGGAGTGAAG 300
GTGAAGTTTC CCTCTGTCTT GATGGTGGCT CTTGCTTTGT GACCTTGGTC AAGGGACTGT 360
GCCTCTTTTT TTTTTAGACG AAGTCTCGCT CTGTCGCCCA GGCTGGAGTG CAGTCGCGCG 420
ATCTCGGCTC ACTGCACGCT CCACCTCCCG GGTTTATGCC ATTCTCCTGC CTCAGCCTCC 480
|
