EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-40070

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:38781210-38782470

Target genes

Number: 8
Name	Ensembl ID

FAM98C	ENSG00000130244
ACTN4	ENSG00000130402
ECH1	ENSG00000104823
HNRNPL	ENSG00000104824
NFKBIB	ENSG00000104825
SIRT2	ENSG00000068903
MRPS12	ENSG00000128626
SARS2	ENSG00000104835

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_23509	chr19:38781037-38782043	Colon_Crypt_1
SE_25091	chr19:38782194-38782724	Colon_Crypt_3
SE_26813	chr19:38780069-38782973	Esophagus
SE_31775	chr19:38780100-38782934	Gastric
SE_36696	chr19:38780325-38782296	HMEC
SE_41685	chr19:38780039-38782935	LNCaP
SE_42903	chr19:38780360-38782842	Lung

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I038289

chr19

38780440

38782868

Enhancer Sequence

AAAGGGTAAG TGGCCCCTTA CCCTCCTCCT GCCATCAGCC TGCCTCCTCC CTTCCTTGAC 60
TGAGCTCAGC CCTGCCCAGC TGTGGTTTAC ATTATCCTTC ACTGTGAACA TCATCTTGGC 120
AGAAAGTCAT GTTTCTGCGT GAGAATGGCG AGGTGGTGGT TTGTCCCACC GTTCAGTGTA 180
CACAGTTGGG GCTGGAGTGA GTCAGTCACA AGGCAGGCCC TGCCCAGGCG GCGTGGGTGA 240
CTGGGGATGA GGTCTTCCTG TTGAGCATTT GAGGACTGCT GCACACGGGC CTGAGGCTGG 300
CCTGAGGTGT GGAGGGAGCG CTGCTATGTG GGGCATAAGA GTTGGTCACG GGTGACAGGA 360
CGGAGGACCA CGGGCCAGGG TGTTTCCCAA CACAGTCTGG TCTGAGCGGG AGGCCAGGCC 420
TCTGGCCTGT GTTTCTGAGC TTGAGTTGCA GGTGATAATG TTGGCACAAA AGACCTGCCA 480
TGCCAGTCTG GCCTCTTTCT CCACCTGTTT CCCGGTGAAG GAGCCAGGAC CTGGCCTGCG 540
AGTCTGTCCT GTTCTAGCAG TGAAGCCTGG TTTGCCAGGC ACGGGGCTGG GAAGCAAGCA 600
GTCTGGGTCT GGAGGGTGGC CCCAAAAAGG CCAACTCTGC AGCTCCACAG CCACATGGGG 660
GAGGCTGCCA CAGGTCACAC TCCTTAGCCG GATCCCCTCC TGAAGAAAAG CATCTGAGCT 720
GACCAGCGAG ACTGCAGTGG GGCAGACACT ATTAAATTTG CTGGCACAGC TCTGAGTACC 780
CCCTCGCTTC CACCCTGACT TCATCCCGCA GTAGCTCTCA GCCCTCCCAG CCCCTGCAGG 840
GCCACGTCTT TCTCTATTGC CGGTCAGCGT GTGTGTGCAC AAAGCCCCTA AGGTTTCATG 900
TGTACACACC GGTGCTAAGT GTTTTTTACA CCCTTGTGCA TCTCTCGGCC TGGGGCTCCT 960
GTGCAGGTTG CCCTGAGAGT TGGGTTTTTA GTTCAAAAAG AAGGAACACA GATGACTACT 1020
CTGCTGGCGA CACGGCCACT CTGCTGGCAC GCACATAGCA TGGCGCCTCC TTTTTTGGGG 1080
GACTCTCCTT GGTGGCATCT CTGGCAGGCT GTGTCCTCTC CAGCTGCAGT TCTGGACCCT 1140
GTCTGGGTTG GGGAGGGGCA TTTGGTCCTC AGGCTGAGCC CACCTGGATT CCCCAGGCCC 1200
TTGGTGAGCG CCACTCTGGC TGCAACTCCC CTTGCCTGGC CCGTCCTGAG GCCCCTCTCT 1260