EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-39627

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:19336080-19336580

Target genes

Number: 12
Name	Ensembl ID

UPF1	ENSG00000005007
GDF1	ENSG00000130283
CERS1	ENSG00000223802
COPE	ENSG00000105669
DDX49	ENSG00000105671
HOMER3	ENSG00000051128
SUGP2	ENSG00000064607
ARMC6	ENSG00000105676
TMEM161A	ENSG00000064545
MEF2BNB	ENSG00000064489
RFXANK	ENSG00000064490
MEF2B	ENSG00000213999

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr19:19336083-19336102	GTGCGTCCCCTGGTGGCCG	-	6.55
KLF16	MA0741.1	chr19:19336212-19336223	GCCACGCCCCC	+	6.62

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I019224

chr19

19335092

19336752

Enhancer Sequence

TGCGTGCGTC CCCTGGTGGC CGCGCCCCCA GGGCTTTCAC TTTGGCGAAG GCCACGTCCC 60
TGAAAGCCTC GCCAAGCCAA GGGAGAGACA CATGGAAGCT CGCTTTGTGA TAAGCCACAT 120
CCCTGGGTGA GGGCCACGCC CCCGGGTGAA GGCCACACCC GTTACGACAA GTCTTTCCCT 180
AGGAGCCCCG TCCTGGGTAA AGAACAGGGC TCCAGAGGAG GCCACTCTGG TGGGGAGTCA 240
CCTTTGCTGG GTGGGCTGTA TCTCCTGAGG TCCGGAGGCC CCATAACCTT GAAAGACAAG 300
CCCCTAGGTG GGGCATACTC TACCTAGAGC CACGCCCATA CGCAGAAACA CCCCCGTGGA 360
AGAGATAATG CCTCAATTGG CCACCTCTGG GCACCACACC GGATGTGGGA GCAGGGATGA 420
CACTCGCCCT TGTTGGGGGG CAGTGGGGAC AGCTTTGGAA GCTGCAAGCA TCAACCCCAA 480
GGAGCCATGT CCTCTAAGTA 500