EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-39618

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:19216540-19217070

Target genes

Number: 18
Name	Ensembl ID

FKBP8	ENSG00000105701
KXD1	ENSG00000105700
C19orf60	ENSG00000006015
UPF1	ENSG00000005007
GDF1	ENSG00000130283
CERS1	ENSG00000223802
COPE	ENSG00000105669
DDX49	ENSG00000105671
HOMER3	ENSG00000051128
SUGP2	ENSG00000064607
ARMC6	ENSG00000105676
SLC25A42	ENSG00000181035
TMEM161A	ENSG00000064545
RFXANK	ENSG00000064490
MEF2B	ENSG00000213999
MEF2BNB	ENSG00000254901
NR2C2AP	ENSG00000184162
GATAD2A	ENSG00000167491

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr19:19216640-19216658	CCTGCCTTCCCTCTTCCC	-	6.31
KLF5	MA0599.1	chr19:19216541-19216551	GCCCCGCCCC	+	6.02

Enhancer Sequence

GGCCCCGCCC CGCCCTGCCA CAGAATCGCC CCGCCCACGC CCGCCCCTCT CTCTTTCTTC 60
TGCACGCCCC GCTCCCTCCT CTTCGTGCCT TGCCCCTAGC CCTGCCTTCC CTCTTCCCAC 120
AACGAAACAC TGGGAGACTC CTCACCCAGG CCCTCCTGAG GGACCCCCTG ACTCTGTCAC 180
ATGCCCTATT CTGTCTTCAG AGCTCCTCTC CTTTGCCCGT TTGTCTCCAG ACGTTTCTCC 240
ACCCCCACGC ATAAATCCCA GAGGGGCAGG TTACTATGCC CCCAGGGCCG TAGGGAAAAT 300
ACGCATCATT AATTTATGCC AGCAGGGGGG AAGGGAAGGC AGCCATGTAA ACCTCAAAAT 360
GAGGCCCACT CCAGAGACCC CATCAGCTTG GCCAGGAGGA AGCCAAACCC GCCTCGTGTT 420
CCTCGGTCCC CACCCCTGTC CCCGCCCCAG CAGAGACGTG CGGGTGCTCC AGGCTGGGCC 480
TCTGTGCATC TGCAACCCCC TCACTGCCGT CTCGCCTTCT CCTCCTGCCC 530