EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-39577

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:18700490-18701660

Target genes

Number: 34
Name	Ensembl ID

JAK3	ENSG00000105639
CCDC124	ENSG00000007080
ARRDC2	ENSG00000105643
CTB	ENSG00000243455
IL12RB1	ENSG00000096996
MAST3	ENSG00000099308
PIK3R2	ENSG00000105647
IFI30	ENSG00000216490
MPV17L2	ENSG00000254858
RAB3A	ENSG00000105649
AC068499.6	ENSG00000250638
PDE4C	ENSG00000105650
KIAA1683	ENSG00000130518
JUND	ENSG00000130522
LSM4	ENSG00000130520
PGPEP1	ENSG00000130517
GDF15	ENSG00000130513
LRRC25	ENSG00000175489
SSBP4	ENSG00000130511
ISYNA1	ENSG00000105655
AC010335.1	ENSG00000256989
ELL	ENSG00000105656
FKBP8	ENSG00000105701
KXD1	ENSG00000105700
UBA52	ENSG00000221983
C19orf60	ENSG00000006015
CRLF1	ENSG00000006016
TMEM59L	ENSG00000105696
KLHL26	ENSG00000167487
CRTC1	ENSG00000105662
UPF1	ENSG00000005007
COPE	ENSG00000105669
DDX49	ENSG00000105671
HOMER3	ENSG00000051128

TF binding sites/motifs

Number: 13

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr19:18701434-18701448	GGCCACGCCCACAT	+	6.74
KLF14	MA0740.1	chr19:18700965-18700979	GGCCACGCCCCCCA	+	6.83
KLF16	MA0741.1	chr19:18700966-18700977	GCCACGCCCCC	+	6.62
Klf12	MA0742.1	chr19:18701434-18701449	GGCCACGCCCACATC	+	6.8
SP1	MA0079.4	chr19:18701432-18701447	CAGGCCACGCCCACA	+	7.26
SP1	MA0079.4	chr19:18700963-18700978	TAGGCCACGCCCCCC	+	7.77
SP3	MA0746.2	chr19:18701434-18701447	GGCCACGCCCACA	+	6.64
SP3	MA0746.2	chr19:18700965-18700978	GGCCACGCCCCCC	+	7.22
SP4	MA0685.1	chr19:18700854-18700871	CAGGCCACGCCTCCTCC	+	6.14
SP4	MA0685.1	chr19:18700963-18700980	TAGGCCACGCCCCCCAT	+	7.12
SP4	MA0685.1	chr19:18701432-18701449	CAGGCCACGCCCACATC	+	7.61
SP8	MA0747.1	chr19:18701435-18701447	GCCACGCCCACA	+	6.22
SP8	MA0747.1	chr19:18700966-18700978	GCCACGCCCCCC	+	6.44

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_69145

chr19:18698812-18702198

Enhancer Sequence

ACGGTGAGGC CACCACCCCT TCCCCGCCGT GTCTCTAGGA CCCTGGCCGG CTCCTCTCAT 60
GACGCACCCC TGGTTGGGGG GTGGTCCCAG TATCCCATAC ACAGACCTCA CCCCTTCCTG 120
TCCCACCCCA ATCCTCTATT AAGGCTTCAC TTGGGGATTC TCGGACCTTG CCCTCTGCTG 180
TTCATCCCCA ATTTTTTTCC CAAGTTTTGT CCTTATTCCC AGAGCACTCC CGCTTTCTCC 240
CAGCTCCGCC TAAATGCTAT TCCAAGATGC CCAGATCCCG CCCCAACAAT GCTCCACCCA 300
CTCTGGTTGT TCCGCGTCTA GGGTCCCACC CTCAACCTCC CGTAGATACA GGCGAGGGGG 360
GTCCCAGGCC ACGCCTCCTC CGTATTATTC CTCCATCACA GCTTTAGTTC TTTGCCTATT 420
TCTCTCTTGC GATCCGCCTG CTCGGCCCTG CAACCGTGTG TGACTGGAAT TCCTAGGCCA 480
CGCCCCCCAT GAGCGACCCG TCTCAGCGTC TCTTTGGCCT TTTTCTTTCT GGTGTTTTTT 540
TTTTTTTTTT TTTTTTTTAA GACAGGCTCT TGCTCTCTTG CTCTCTCACC CAGGCTAGAG 600
TGCAATGGCG CGATCTCGGC TAACGGCAAC CTCCGCCTCC CAGATTCAAG CGATTCTCCT 660
GCCTCAGCCT CCTGAGTAGC TGGGATTACA GGCATAATTT TTGTATTTTG TATTTTTTTT 720
AGTAGAGACG GGGTTGTGCC ATATGGGCAA GGCTGGTCTC GAACTCCTGG TCTCAAGCGA 780
TCCGCCCTCT TCTGCTTCCC GAAGTGCTGG GATTTCAGGC GTGAGCCACC GCGTCCAGGC 840
TTTTTGGCCT ACTTTTATCC TGGGTCCCCG TCCCTGGGAC CATGAGGCGC AACCTAACCC 900
ACCCCTACGG CCAATGCCTG GCTAAGACGT CACTGTTGTT CCCAGGCCAC GCCCACATCG 960
CGCTCAGCAC TGCCTCTGGC CTGCCTGCTG TCTCCTTTCT GAGAGAGCCT CTAAACTGAA 1020
TTTCGGACTC TTCCTACACA AAGCACTGCC CCTCGTGGTT CTACCCGGGC ACTGCCTTTC 1080
TGGGTGCCTC TGTTTTTTCC TGAACATCCT TGGAGGGCAG GGGGTGGGTT CTGCTCGTGG 1140
AGACATCCTT CGTGTTGCTC ATTCCCCCAC 1170