Tag | Content |
---|
EnhancerAtlas ID | HS105-39560 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:18583800-18585650 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Myod1 | MA0499.1 | chr19:18585446-18585459 | GGAAACAGCTGCT | - | 6.14 | Tcf12 | MA0521.1 | chr19:18585449-18585460 | AACAGCTGCTG | + | 6.32 |
|
| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_01013 | chr19:18583782-18585231 | Adrenal_Gland | SE_06012 | chr19:18583560-18585659 | Brain_Hippocampus_Middle | SE_08139 | chr19:18583607-18586053 | Brain_Inferior_Temporal_Lobe | SE_08861 | chr19:18584782-18585073 | Brain_Mid_Frontal_Lobe | SE_12155 | chr19:18585169-18587297 | CD3 | SE_15037 | chr19:18584199-18588821 | CD4_Memory_Primary_7pool | SE_17983 | chr19:18583928-18591813 | CD4p_CD25-_CD45ROp_Memory | SE_19379 | chr19:18584343-18587227 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20439 | chr19:18584612-18591598 | CD56 | SE_21047 | chr19:18584730-18587121 | CD8_Memory_7pool | SE_22689 | chr19:18583973-18591671 | CD8_primiary | SE_23216 | chr19:18585225-18585732 | Colon_Crypt_1 | SE_23893 | chr19:18585298-18585693 | Colon_Crypt_2 | SE_26168 | chr19:18583622-18584503 | Duodenum_Smooth_Muscle | SE_26932 | chr19:18583788-18585763 | Esophagus | SE_31681 | chr19:18583754-18585763 | Gastric | SE_41560 | chr19:18583829-18585119 | LNCaP | SE_42344 | chr19:18583735-18585788 | Lung | SE_50125 | chr19:18583720-18585782 | Sigmoid_Colon | SE_51145 | chr19:18583648-18585641 | Skeletal_Muscle | SE_52434 | chr19:18583680-18585846 | Small_Intestine |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr19 | 18585304 | 18585354 | chr19 | 18585370 | 18585459 | chr19 | 18583828 | 18584810 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I018472 | chr19 | 18583787 | 18592442 |
|
Enhancer Sequence | TTCTCAGGAG AGGGGAAAGG AAATGCACAC ACTCTGAAAA TTATAGGCAA GGTCACCGGA 60 GCAGGGTTTT AGAAGGATCA GTAGGAGTTC CTCAGATGGA CAGAGGGCTG GGGACACATG 120 ACAGGTAAGA ATGGGGCCTC CAGACACAGG CAACAGGCTG GCGGAAGGCC CAGGATGCAG 180 GGGCGGGGAG TGTGCCATCC TTGGAAAGCC ACCACCAGCC TGTGAATCCA CCGGGAGAGA 240 AGGGCAAGGC TCAAGGTGCT CACAGCCCTG CCAGGAAAAA GCAAAGACAG GTCAGGGTTG 300 ACCCTGGATC ATGACTCTCC CAAGGACCCA TACAGGCAAA AGCAGCCCCC TCCACTCTCA 360 CAGCCCCAGC TGATCCCCTG AAACCACCAA CCAGGCTAAG TCCTGTCTCA CAAACACTGG 420 CTTTTAACAA CCAGGTGGGT GAGCACTGTC TATCAGAGCA GGTGCGGTGG GGCCACCTTG 480 GAGCCTGGGG TGGGAGCCTG AGGCCTGCAC AGCTCCACCA CACGGCCTTG GGGCAGTCAC 540 ATGGCTTCTG GACAGCTGGT CACTGAGCTT GGAGCAGTGG AATTTCCAAG GAAAAAATAT 600 ACAAAAGAGC TCAAAATAAA TACTGACGCT TCAGCTATTC AGAGACCAGC CTTCTGGCAG 660 TATCTGAGAA AGAACTGCGA GCCAGAGGAG GACTGCACCT CTGCATCTTC TTCCCTCTTC 720 CCAACCTGGG GCCCTAAGCG TAGATCTCAG TGTCCCAGAT GCTACCCCAC AGCATAGCCC 780 TGGCTGATCA CCATGATTCT TGGTCCCCAA ACCCACCCCT GCACCACCTG GCCCCACTGC 840 CCCACTCAGG TCCAGCCCAC TGAGATGCCC TCCCACCCAG GCCTTGCTCC TGTCCTCATA 900 GTACCCCGTC CTGGGCTCCG TCTCCACTGC TCAGGTCTCA CTCCCTCCCA CCCTGGTCTG 960 CCCATAGCTC TCCCCAGAGG GCAAAGCACT ACTTGAGTCT GGAGAGGCCT GTCGGAAGAC 1020 CCGGGGTAAG CGGAGCAGCT CCACACCTGC GACAGTATCA GAGACAACAC CTACCCCATG 1080 GGTCAGCCCA GGGTCCGCCC TCTGGAGCCA CTCAGCACTG TTCCAGGACT CCAGCTTGAG 1140 ATGGCACAGG GCCCTCCAAC TGCTCACATC CAGTGCCCAT CAGTTGGGAA AGACAGGAGC 1200 TGCTAGGAGC AGCGGAAGCC GCCTGGGACA TGAGAGATGG CTGGCCTTTC AGCACCTGCT 1260 CCATGTGTGC CCTGAGCCAT GGGTCTGCTT GGCCAGCTTA GACCACGCAG CTGTATACAT 1320 ATGACATGCA TAGTGCCCAG AGTGGGAGGC ACCGAGTGCC TCACTTTGGT CTACCAGGAG 1380 CCCCCTTCTT TGCCAAGTCT CTCCAAGGAT TTTGCCAAGA CTCCCCAAGG ATTCTGCTGT 1440 TTAGGGGAGA ACAGAGGGAT GGTGCCCCTG CACGCTAACA CCACCCAGGC CGTGATGCCC 1500 CAGAAACTGC CCCATGCTTC TCAAACACGC CACCCCTCAA CAAATACATG GGCCCACTCC 1560 ACAGCGAGCA CGATTCACGG CGCAAGCCAC CACTGTCCAT GGTGCAACAC GTCCATGGCC 1620 CACTCCCTTG TCCTGTTCCA AGACCAGGAA ACAGCTGCTG CAGTCACAAG GGCCACTGTG 1680 CTACTGCGAC AAGGGGGGCT CGTCTAGAGC AGCTCAGGAA GGGCTAGCCC TGTACCCCAA 1740 AACACGACTC AACCACCAGC CTGTGCTGCT ACTGCAGAGA ACAGGGGACC TCGGCCTGGC 1800 TGGGACCTTG GGGAAGCAGC ATCTGAATGA CCTTTGCTAC AAATTTGGTT 1850
|