EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-39514

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:18322750-18324170

Target genes

Number: 27
Name	Ensembl ID

RPL18A	ENSG00000105640
SNORA68	ENSG00000207166
CCDC124	ENSG00000007080
CTB	ENSG00000243455
MAST3	ENSG00000099308
PIK3R2	ENSG00000105647
IFI30	ENSG00000216490
MPV17L2	ENSG00000254858
RAB3A	ENSG00000105649
AC068499.6	ENSG00000250638
PDE4C	ENSG00000105650
LSM4	ENSG00000130520
PGPEP1	ENSG00000130517
GDF15	ENSG00000130513
LRRC25	ENSG00000175489
SSBP4	ENSG00000130511
ISYNA1	ENSG00000105655
AC010335.1	ENSG00000256989
ELL	ENSG00000105656
FKBP8	ENSG00000105701
KXD1	ENSG00000105700
UBA52	ENSG00000221983
C19orf60	ENSG00000006015
CRLF1	ENSG00000006016
TMEM59L	ENSG00000105696
KLHL26	ENSG00000167487
UPF1	ENSG00000005007

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr19:18323490-18323502	GTTTGTTTGTTT	+	6.32
Nr2f6(var.2)	MA0728.1	chr19:18323716-18323731	TGAACTCCTGACCTC	-	6.22
SREBF1	MA0595.1	chr19:18323554-18323564	GTGGGGTGAT	-	6.02

Enhancer Sequence

CCTACAGAGA TCGAGGCTTG GGAGGGCACT GGCGGGGCCC AGCCACACCT AGACCTGGCA 60
CCTCCACAGA CAGGCTTGGT GCCATGGACA CATTCATCTT ACAGGTGGGG AAACTGAGGC 120
CTGAGACCTG AAGAAATGGT TAAGGCACAG GCATGTGACT CTTGCCATTT CTTCAAGTTT 180
GGCATCCAGT CGGCACTTCA TAAATGAAGC TAAATGAGAA TTGCAAAAAT GGAGGCCCTC 240
TCCGATTTTT TTTTTTTTAA TGAGTTAGGG TCTCACGCTG TGACCCTGGC TGGAGTGCAG 300
TGGCAAGATC TTGGCTCACT GCAACCTCTG CCTCCCAGGC TCAAATGATC CTCCCAGCCC 360
AGCCTCCCGA GTAACTGGAA CTATAGGCAT GCGCCACCAT GCCTGGCTAA TTTTTGTATT 420
TTTGTAGAGA CGGGGTGTTG CCCAGGCTGG TCTCAAACTC CTGAGCTCAA GCGATCCACC 480
CATCTCAGCC TCTCAAAGTG CTGGGATTAC AGGTGTGAGC CACTGAGCCC AGCTTTTTTT 540
TTTTTTTTTT AAGAGACAGG GTCTCACTCA GTTGCCCAGG CTGGAGTGCA ATGGTGCAAT 600
CACAGCTCAC TGCAGCCTCT AACTCCTGGC CTCAAGCAAT CCTCACACCT TGGCCTCCCA 660
AAGTGCTGGG ATTACAGGCA TGAGCCACTG CGCCCAGCCT TCACTCTAAA TGTGTAAGAA 720
ACCTGGCTAA AATTGTTTTT GTTTGTTTGT TTTGGCTTGT TTTTTTGAGA TGGAGTCTTG 780
CTTTGTCACC CAGGCTGGAG TGCAGTGGGG TGATTTCGGC TCACTGCAAC CTCTACCTCC 840
CAGGTTCAAG CAATTCTCTG CCTCAGCCTC CCGAGTAGCT GAGATTACAG GCGCCCGCCA 900
CCACACCCAG CTAATTTTTG TATTTTTAGT AGAGATGGGG TTTCACCATC TTGGCCAGAC 960
TGGTCTTGAA CTCCTGACCT CATGATCTGC CTGCCTCGGC CTCCCAAAGT GCTGGGATTA 1020
TAGGCGTGAG CCACTGCGCC CGGCTGCTAA AGTTGTTTTT AAAGTAAAAC CGGCCGGGCG 1080
CGGTGGCTCA CGCCTGTAAT CCCAGCACTT TGGGAGGCCG AGGTGGGCGG ATCTCAATCT 1140
CATGGAGATT GAGACCATGG TGAAACCCCG TCTCTACTAA AAATACAAAA AAAATTAGCT 1200
GGGCGCGGTG CCGGGCACCT GTAATCCCAG CTACTCGGGA GGCTGAGGCA GGAGAATGGC 1260
GTGAACCTGG GAGGCAGAGC TTGCACTGAG CCAAGATGGC GCCACTGCAC TCCAGCCTGG 1320
GCGACAGAGT GAGACTCCGT CTCAATAAAT AAATAAATAC ATAAATAAAT AAATAAAGTA 1380
AAACCAAAAT TTAAAAAGGA AGCCCCAGTG CCCATCCAGC 1420