Tag | Content |
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EnhancerAtlas ID | HS105-39497 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:18228110-18230310 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EGR1 | MA0162.3 | chr19:18228781-18228795 | CCCGCCCCCGCACT | + | 6.21 | EGR3 | MA0732.1 | chr19:18228780-18228795 | CCCCGCCCCCGCACT | + | 6.83 | EGR4 | MA0733.1 | chr19:18228780-18228796 | CCCCGCCCCCGCACTC | + | 6.16 | IRF1 | MA0050.2 | chr19:18230233-18230254 | TGTGGGTTTCACTTTTGCTTC | + | 6.67 | KLF14 | MA0740.1 | chr19:18228423-18228437 | GGGTGGGCGTGGTA | - | 6.08 | KLF16 | MA0741.1 | chr19:18228599-18228610 | GCCCCGCCCCC | + | 6.02 | KLF16 | MA0741.1 | chr19:18228764-18228775 | GCCCCGCCCCC | + | 6.02 | KLF16 | MA0741.1 | chr19:18228779-18228790 | GCCCCGCCCCC | + | 6.02 | KLF5 | MA0599.1 | chr19:18228599-18228609 | GCCCCGCCCC | + | 6.02 | KLF5 | MA0599.1 | chr19:18228764-18228774 | GCCCCGCCCC | + | 6.02 | KLF5 | MA0599.1 | chr19:18228779-18228789 | GCCCCGCCCC | + | 6.02 | SP1 | MA0079.4 | chr19:18228761-18228776 | CAGGCCCCGCCCCCA | + | 6.56 | SP3 | MA0746.2 | chr19:18228424-18228437 | GGTGGGCGTGGTA | - | 6.37 | SP4 | MA0685.1 | chr19:18228761-18228778 | CAGGCCCCGCCCCCAAC | + | 6.57 | SP8 | MA0747.1 | chr19:18228424-18228436 | GGTGGGCGTGGT | - | 6.32 | Zfx | MA0146.2 | chr19:18228761-18228775 | CAGGCCCCGCCCCC | - | 6.19 |
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| Number of super-enhancer constituents: 16 | ID | Coordinate | Tissue/cell |
SE_03607 | chr19:18228860-18229540 | Brain_Angular_Gyrus | SE_03607 | chr19:18229563-18230152 | Brain_Angular_Gyrus | SE_04405 | chr19:18227552-18228448 | Brain_Anterior_Caudate | SE_04405 | chr19:18228707-18231550 | Brain_Anterior_Caudate | SE_05422 | chr19:18228732-18231107 | Brain_Cingulate_Gyrus | SE_06334 | chr19:18227733-18231497 | Brain_Hippocampus_Middle | SE_07235 | chr19:18227822-18231343 | Brain_Hippocampus_Middle_150 | SE_08343 | chr19:18228675-18231084 | Brain_Inferior_Temporal_Lobe | SE_10753 | chr19:18227967-18228613 | CD19_Primary | SE_10753 | chr19:18228829-18231042 | CD19_Primary | SE_19731 | chr19:18227880-18228741 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_19731 | chr19:18228750-18231627 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_22919 | chr19:18227678-18228683 | CD8_primiary | SE_22919 | chr19:18228828-18231785 | CD8_primiary | SE_60731 | chr19:18199190-18231325 | DHL6 | SE_62682 | chr19:18196873-18231497 | Tonsil |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr19 | 18230044 | 18230277 | chr19 | 18228597 | 18228694 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I018117 | chr19 | 18228011 | 18232079 |
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Enhancer Sequence | TTTGTGTAAT TCTCATGTCA GTTCAGTTTT CCTCCAATTT CACAGTTGAG GAGACTGAGG 60 CTGGAGTTCA ATCAGGTGGC TGCTTCCTAA CTGAGGCAGG GCTGATGGCC TTTCCCGCCA 120 CACACAGACA GAGCATGTCA GACGCCCCGA CTCAATTTGC CAAACACACC CTCTATGCCA 180 GTCCGGTGCT GGGAGCTGCT GGGACCCTAA GGAGCCCCCA GCCTGGGGAA GACATAGCCG 240 GACAGACAGG AAAGCGGGTT TTTCAGAGGA GAGGACGCAG TTTTGCCAGG CTAGATTCCA 300 AGCAGTGGGG CCAGGGTGGG CGTGGTAGCA TGAGCCGGCC AGGACGCTGG GGTGGGTCTT 360 GGGTGCCGCA CTGAGAAGGG GTCAGTGCTC TGGGAGAGAG GAAAAAGATG GAGGGAGCGA 420 TTAGATTTAC ATTTTAGCAG AAAGGAGCCA AAATGCCTGC CCCTAGCTCG AGGTTAAGGT 480 GCTGCCAACG CCCCGCCCCC GCCGCCCGCG GTCGTAGCAA CGCCCGGCCT CAGCCGCCCG 540 CGGCCCTAGC AACGCTCCGC CTCTCCGCCC GCGGCCATGG CAGCGCCCCG CCCACTCGCC 600 GGCACGCGGG TCCGCCGGCC TCGCTTCCGC GTCGCTCGCT CCGCCTCCCG ACAGGCCCCG 660 CCCCCAACGG CCCCGCCCCC GCACTCGCCT GGGCGGAGTT CCAGTCGCGC TCGGGGGCGC 720 GCGCTTCCTT CTCGCCGCCC CCCCATCCCC GCAGCCCCGT GCGCCCCCCT CCCTGTCCGG 780 CTCCGCGGGG CTCCTGGGGC CGATCCCACC GCCGAGGCCT CCCTTCCCGG CCTCGGGCGG 840 CTGCGGCGGC ACAAAGGGAA GCAGCATGTC CGACCCCAGC TACTGGACGG CGGTGGCGGC 900 TCCCGGCCAT CGGAGCCGCC TGGCAAAAGG CGCGCTGCTG CAGCGCTCCA AGAGGTAGGG 960 GGCACGGCGC CGGCGAAGGC TCGGCGGCCA GCCGAGCAAA CAGGAGTTGC CAGAAGTGTG 1020 TCCTGGCCGC GTGGCGCGGA CCACGGCGAG CGTCTGTCTG TGGCAGCAGT GGGAAGGGGG 1080 GAGGACGCCT GTGGATCGAG GTGTCCCCTG GGGTCCCTGG CACCCTCCTT TCGCCCCTCG 1140 TTCCCTGGAC TGGGGTGTCT GTCCGCCAGC GTCGCAGCTG GGGTGGTGAC AGACAGGAGT 1200 GAGTTGAGAT TGAGCTAGGA TTTGAACCCG GGTGTCCAGG GCTGGGCAGA ACCAGGGAGG 1260 AACTTCTTGG AAAAACTGAG GCTGATCTGC CGCTGGGGGT CCATTCAGCA GAAATGTTGG 1320 CTCAGAAGCA AATATTTACT GCACGAGGCT GGCATTTGGG TGGGGTGTCA GGAGTCCAGA 1380 TAGTTGGGGT TAACCCCCGC CAAAGCCTCA CCGCTCTTGG AGTCTCAGTT TCCCCTTTTG 1440 AAAAGCAGAG AGGATAAGTG AGGGCTGTGG ATTCTACCAG ACCTGGGTTC AAATTTCGAC 1500 TCAGCCACTA CCAGGCTGTG TGACCTCAAG TAGCTCCTTA ACCTCTCTGT GCTTGGGTTT 1560 CTCATTGGTG CTGGACTGGG GCAAAGTCTG GGCGGTGGGA CCAGCTACCG AAAGACCTTG 1620 AATGCTGAGT CCAGGGCTTA AACTTACCTC CAAGATCGTG GGGAGCATTG GAGGGGGAAT 1680 ATGGGTGCCA GAGGGATGAG GTGCAGGAGG CTGGCTTCAG GCCCCTGCTT TCTGCCACAT 1740 TCTCTCTGTT GTGTCCTGGG TACCAAGAGA GGATCGTTCT CAAATGGCAA CTTCTCGAGG 1800 TCCTGGATCT CCTCCAGGAA GAGTTGAACA AACAGTCGGC CCTGCATAGA TGCTTGGGAA 1860 GTGAACAGAT GATGCTTAGT TCTCCTTTGA GGCCTCACAT TTGGCCGTGT TTTCAAGAAG 1920 ACCTCGCCCA AGAACAGGAG GGAGGGCAAC GAAGTGTTTT TCCCAAATGC TTTTGGAAGC 1980 AGCAAGTGAT ACAGCAGGAT CGGGGAGGGA GGGTGCTGGT GGTGCAGTGT GGGGGCGAGG 2040 AACCAGGTGA GGGGCTGGGA GAGGATGTGG AGACAGCCAG GTGAGCGTGC ATTGAGGGGT 2100 TGGCAGGAAG TTTTGCAGAA ACCTGTGGGT TTCACTTTTG CTTCTGCAGC TCAGGCTGGG 2160 AGACAATCAC TGTGACTGTT GACATCTGTG GCTTCAGTTT 2200
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