Tag | Content |
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EnhancerAtlas ID | HS105-39341 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:16425720-16428810 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Lhx3 | MA0135.1 | chr19:16428265-16428278 | TAATTAATTAATT | + | 6.78 | Lhx3 | MA0135.1 | chr19:16428269-16428282 | TAATTAATTAATT | + | 6.78 | Lhx3 | MA0135.1 | chr19:16428262-16428275 | AATTAATTAATTA | - | 6.78 | Lhx3 | MA0135.1 | chr19:16428266-16428279 | AATTAATTAATTA | - | 6.78 | Lhx3 | MA0135.1 | chr19:16428270-16428283 | AATTAATTAATTA | - | 6.78 | Lhx3 | MA0135.1 | chr19:16428261-16428274 | AAATTAATTAATT | + | 6.92 | Lhx3 | MA0135.1 | chr19:16428273-16428286 | TAATTAATTAAAT | + | 6 | POU6F1 | MA0628.1 | chr19:16428263-16428273 | ATTAATTAAT | + | 6.02 | POU6F1 | MA0628.1 | chr19:16428267-16428277 | ATTAATTAAT | + | 6.02 | POU6F1 | MA0628.1 | chr19:16428271-16428281 | ATTAATTAAT | + | 6.02 | POU6F1 | MA0628.1 | chr19:16428263-16428273 | ATTAATTAAT | - | 6.02 | POU6F1 | MA0628.1 | chr19:16428267-16428277 | ATTAATTAAT | - | 6.02 | POU6F1 | MA0628.1 | chr19:16428271-16428281 | ATTAATTAAT | - | 6.02 | SOX10 | MA0442.2 | chr19:16428704-16428715 | TGCTTTGTTTT | - | 6.02 |
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| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_02121 | chr19:16426207-16428157 | Aorta | SE_14486 | chr19:16426942-16427904 | CD4_Memory_Primary_7pool | SE_30197 | chr19:16425439-16428327 | Fetal_Muscle | SE_31861 | chr19:16426443-16427896 | Gastric | SE_37239 | chr19:16425803-16428299 | HSMMtube | SE_38557 | chr19:16425794-16428412 | HUVEC | SE_41301 | chr19:16426162-16428123 | Left_Ventricle | SE_42601 | chr19:16426138-16428104 | Lung | SE_45405 | chr19:16426148-16428002 | NHLF | SE_49016 | chr19:16426131-16428080 | Right_Atrium | SE_53383 | chr19:16426178-16428098 | Spleen |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr19 | 16426523 | 16427721 | chr19 | 16428388 | 16428438 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I016314 | chr19 | 16425650 | 16428905 |
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Enhancer Sequence | CCGCCTCCAG GGTTCAAGCG ATTCTCCTGT CTGCTACCTT CATAAACACA TGATGGGCAG 60 GCATTCTCAT GCCCCTTTGA CGAATGAGGG ACTGAAGTTC AAAAAGAAAA CATCAGGCCA 120 GCGCAGTGGC CCACGCCTGT GATCCCAACA CTTTGGGAGG CTGAGGCAGG CGGATCATCA 180 CTGGGATCAG GAGTTTGAGA CCAGCCTACC CAATATGGTG AAACCCCGTC TCTATTGAAA 240 ATATAAAAAT TAGCTGGGCG TGGTGGCACA TGTCTGTAAT CCCAGCTATT CAGGAGACTG 300 AGGCGGGAAA ATTGCTTGAA CCTGGGAGGC AGAGGGTTGC AGTGAGCTGA GATTGCGCCA 360 CTGCACTCCA GCCTGGGCAA CAGGGCGAGA CTCCATCTCA AAAAAAAAAA AAAAAAGAAT 420 ATCATTCACT CAAGGTCAAC AAGTACAAGT GCCAGAATCT AAACTCAGGG CTCCAGCTGT 480 CCATCGCTTA CCTCACTGAA CAGACCAACT GGGAGGATTA AATGAGAAAA TACATCCAGA 540 CAAGCCTGGC CAACATGGTG AGACTCCCGT CTCTACTTAA AATACAAAAA TTAGCCAGGT 600 GTAGTGGCGT GTGCCTGTAA TCCCAGCTAC TTGGGAGGCT GAGGCAGGAG AATCACTTGA 660 ACCTGGGTGG TGGAGGTTGC AGTGAGCCGA GATCGTGCCA CTTCACTCCA GCCTGGGTGA 720 CAGAGTGAGA CCTGGTCTCA AAAAAAAAAA AAAAGAAAAT ACATCCAGAT CCTCAGCATA 780 GGGCCTGGTA TACATTAGGT GCTCAGTAAG TATTGCTCTC TCCCCCTCTT CTGTCCTGTG 840 TGTCAATAAG AGCGAGGCAG TAATGGCCTG GCTGGCAAGA AGATGATGAG AGGTTCTGAT 900 GGGAACCCAT CAGTCATCAG CCCAGTGCAA TCCCGCATCT TCCCCAAGCA CTCGCGACCT 960 ATTTATGTAG TAGTAAGAAA ACTCCAGAGG CAGGGCCAGG CGTGGCGGCT CAGGTCTGTA 1020 ATCCCAGTGC TTTGATAGGC AAGGGCAGAA GGATCGCTTG AGCCCAGGGG TTTGAGGCTG 1080 CAGTGACCTA TGATCACACC ACTATACTCC AGCCTGGGAG ACAGAGCGAG ACCCTGTCAA 1140 AACACACACA CACACACACA CACACACACA CAAACTCCAG AGACAACCAG GCAAATCACA 1200 AAGTGACCTT TCCTATCAGA CCTCAGCTCC AAGCATTGCA GCGACAAGGT GGTGACCCGA 1260 GATAAGAAGC GCACTTGCAG AGGGTGCCTC TGCCCGTATC TCTCCGCATC CTCAAGAAAC 1320 ACAGAACTAT CAAACATTTT TGCAACATGA GGAGCCAAGT TTTGCAACAT ACTGAAAAAG 1380 GGTTGTGCAA ACTTCAGCAG AAACACCCCA ATTGCCCCAG CTGGGAGTCA TCATCCAGTT 1440 GCTGCTGTAA TGTGATTGTA ATTCCTCCAG TGTTCATAAT TTGTCTTGGA AGCTCAGCTG 1500 TATTTTACAT GACGTGTTTT CTGTAGAATT CCTGAGTACT TGCTCTTGGG ATCTGAGCCA 1560 AGTGCACACA ATAGCTATTT GGGGCAAAAC AGCTGGTAAA GAGAAAGGCA GCTTAGACCC 1620 TGAAGAAAAG TGGAAAGAAT TCAAGGTTAC TAGAAATGTC CAGGGCCCAG TAAAAGAAGA 1680 TTGTAATCTC TCTATGTGCA GAAACAGGCC ATATACTTCA TCAGTTTCCT CTCCATGCTC 1740 AGCTCAGCAT GGAGCGGAAG CTCAGTATTT ATTTGTGGCT CAGACGAAAA ACTTCTTGTT 1800 TGCAAGTTTC CTGAGCCCTT GAAGACAGCC TGGCAGGAGA CAACAAATGC AAAGCTGCAC 1860 ACGTACCACT TATCCAATCC CCTGTTAGTG ACAGACATCA CCAGTCAATC AGTCAATCAC 1920 AGACATGACC AATCCATCAC AGCACTGGGC CTGGCTACAA CCTCAGAATC TGCACCAGCA 1980 CAGTGCTAAA AGCAACTATT ATCAACAGAT TTGAGGAAAA TATTCTGCCT CCTTGGTCTA 2040 CATTTATAAT GTTGAGTTGT TAGGAGAAGA TAAGGGGCAG CAAGAAAGAG ATGACAATAA 2100 GATAATCACC ATCGAGGCTG GGCACTGTGG CTCATGCCTG TAATCCCAGC ACTTTGGGAG 2160 GCTTAGGCAG GAAGATCACT TGAGCCCAGG GGTTCGAGAC CAGCCTGGGC AACAAAGTGA 2220 GACCCTGTCT CTACAAAGAT TAAAAATTAG CCAGCCAGGC CAGGCACGGT GGCTCACGCC 2280 TGTAATCCCA GCACTTTGGG AGGCCAAGGC GGGCAGATCA CCTGAGGTTG GGGGCTCAAG 2340 ACCAGCCTGA CCAACATGGA GAAACCCAGT CTGTACTAAA AATACAAAAT TAGCCGGGCA 2400 TAGTGGCGCA TGCCTGTAAT CCCAGCTACT CGGGAGGCTG AGGCAGGAGA ACTGCTTGAA 2460 CCCAGGAGGC AGAGGTTGTG GTGAGCAGAG GTCGCACCAT TGCACTCCAG CCTGGGCAAC 2520 AAGAGCAAAA CTCCATCTCA AAAATTAATT AATTAATTAA TTAAATAAAA ATTAGCCAGT 2580 CGAGGTAGTG CACACCTGTA ATCCCAGCTA CTCAGGAGGC TGAGGCGGGA GTATTGCTTG 2640 AGCCTGGAAG TTGAAGGCTG CAGTGAACTA TGATCGCATC TCTGCATTCC AGCCTGGGTG 2700 ACCCTGTCTC CAAAAAACAA ATCATCATCA GGAAACATAA AGTTCCCAAC AGTGGCCAGG 2760 TGTGGTGGCT CACGCCTGTA ATCCCAACAC TTTGGGAGGC CTAGGTGAGT GGATCACCTG 2820 AGGTCAGGAG TTTTAGACCG AGTCTCCCTC TGTCACCCAG GCTGGAGTGC AGTGGCATGA 2880 TCTTGGCTCC CTGCAACCCT GCCTCCCAGA TTCAAGTGAT TCTCCTGCCT CAGCCTCCCA 2940 AGTAGCTGGG ACTACAGATG TGTGCCACCA TGCCTGGCTA ATTTTGCTTT GTTTTTGAGA 3000 TGAAGTCTCG CTCTGCTGCC CAGGACGGAG TACAATCAGC TCACTGCAAC CTCCACCTTC 3060 CAGGTTCAAG GGATTCTCCT GCCTCAGCCT 3090
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