EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-39249

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:14591590-14592340

Target genes

Number: 13
Name	Ensembl ID

SAMD1	ENSG00000141858
PRKACA	ENSG00000072062
ASF1B	ENSG00000105011
CD97	ENSG00000123146
DDX39A	ENSG00000123136
PKN1	ENSG00000123143
PTGER1	ENSG00000160951
AC012318.1	ENSG00000224543
GIPC1	ENSG00000123159
DNAJB1	ENSG00000132002
TECR	ENSG00000099797
NDUFB7	ENSG00000099795
CLEC17A	ENSG00000187912

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HEY2	MA0649.1	chr19:14592060-14592070	GACACGTGCC	+	6.02
IRF1	MA0050.2	chr19:14591777-14591798	ATTTAGTTTTCCTTTCTCTTT	+	6.42
Npas2	MA0626.1	chr19:14592060-14592070	GACACGTGCC	-	6.02
ZNF263	MA0528.1	chr19:14591614-14591635	CCTCTTCCCCCTCCCTCCCCC	-	7.1

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I014479

chr19

14590247

14591884

Enhancer Sequence

CTGCAGGGGT GGGAGACGCT GAAACCTCTT CCCCCTCCCT CCCCCTTTTC TAATCACCAC 60
TGGAGGGCGA AGGGAGAGAG CTGGGAGAGG ACTAGGGGGA TTCCATCCCA GTAACTCATC 120
ACCCACTGAG CCTGAGCCAG GGCCACAGCA GGGCCCACAT TAGCGTGTCA GCTCTGCTAG 180
GACTAGGATT TAGTTTTCCT TTCTCTTTTT GAGACAGGGT CTTGCTCTGT CACCCAGGCT 240
GGAGTGCAGT GGTGCCATCA TAGTCACTGC AGCCACAACC TCCCAGATTC CGGCAATCCT 300
CCCACCTCAG CCTCCCAAGT AGCTGGAACT ACAGGTGCTC GCCACCATGC CTGGCTAATT 360
TTTGTATTTT TTGTGGAGAT ATGGGGTCTC ACTATGTTGC ACAGGCTGGT CTCCAACTCC 420
TGGGCTCAAG TGATCCTCCT GTCTCAGTCT CCCGAGTAGC TGGGACCACA GACACGTGCC 480
ACCACACCCA CATAGTTAAA ATAATTTTTT TTAGAGATGG GAGCCTCATT ATGTTGCCCA 540
GGCTGGCCTG GAACTCCTGA GCTCCAGTGA TCCCCCCATC TCAACCTCCC AAGTAGCTGG 600
GACTATAGGT GTGCACCACT GTACCCAGCT AGGATTTCGG TCCTAGCAAA AATTCATTGC 660
TGTGCCAGGT GCGGTGGCTC ACGCCTGTAA TCCCAGCACT TTGGGAGGCC GAGGTGGGCA 720
GAACACGAGG TCAGGAGATC GAGACCAACC 750