EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-39197

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:14080990-14082170

Target genes

Number: 18
Name	Ensembl ID

CCDC130	ENSG00000104957
MRI1	ENSG00000037757
C19orf53	ENSG00000104979
NANOS3	ENSG00000187556
C19orf57	ENSG00000132016
CC2D1A	ENSG00000132024
DCAF15	ENSG00000132017
PODNL1	ENSG00000132000
RFX1	ENSG00000132005
IL27RA	ENSG00000104998
SAMD1	ENSG00000141858
PRKACA	ENSG00000072062
ASF1B	ENSG00000105011
DDX39A	ENSG00000123136
PKN1	ENSG00000123143
GIPC1	ENSG00000123159
DNAJB1	ENSG00000132002
NDUFB7	ENSG00000099795

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr19:14081090-14081104	AGCCACGCCCACAT	+	6.22
SP1	MA0079.4	chr19:14081088-14081103	ACAGCCACGCCCACA	+	6.05
SP3	MA0746.2	chr19:14081090-14081103	AGCCACGCCCACA	+	6.37
SP4	MA0685.1	chr19:14081088-14081105	ACAGCCACGCCCACATA	+	6.21
SP8	MA0747.1	chr19:14081091-14081103	GCCACGCCCACA	+	6.22
Zfx	MA0146.2	chr19:14081905-14081919	GAGGCCGAGGCGGG	-	6.01

Enhancer Sequence

GGGTGGGAGG GAGATGGGAG AGCACCAGTC AGAGGCGCTT CCGTCATCTC TGAGTGCTGG 60
GGCTGAGTGC CCCACATCGA CTTCCAGCTG GGATCCTGAC AGCCACGCCC ACATAAGTTA 120
GCACATCCTA CTGCCATCCT CTCCAAGAAC TATGTCCCAC AGAACTCTAG AACTGCACTG 180
TCCAATACAG TTGCCATGTA TAGCTAAATA CATTAAAGGC CGGGCACGGC TCACCCCTTT 240
AGTTCCAGCA CTTTGGGAGG CTAAGGTAGG AGGATCACTT GAGCCCAGGC TGGGCAACAT 300
AGGGAGACCC TGTCTCTACC AACGAATTTT TAAAAAAATT AGCTAGTGTC GTGGTGCACA 360
CCTGCAGTCC CAGCTATTTG GGAGGCTGAG GCAAGAGGAT CCCTTCAGCT CAGAAGTTCA 420
AGGCTGCAGT AGGCTATGGT CAAGCCACTA TACTCCAGCC TGGATACAGT GAGACCTTGT 480
CTCAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAT TAGCAGGACG TGGTGGCTCA 540
TGCCTGTAAT CCCAGCACTT TGGGAGGCCA AGGCAGGTGG GTGGATCATG AGATCAGGAG 600
ACTGAGACCA GCCTGGTCAA TATTGTGAAA CCCCGTCTCT ACTAAAAATA CAAAAATTAG 660
CTGGGAGTGG CGGTGTGCGC CTGTAGTCCC AGCTGCTTGG GAGGCTGAGA CAGGAGAATC 720
ATTTGAACTT GGGAGGCAGA GGTTGCAGGG AGGCAGAGGC TGCAGTGAGC CAAGATCGCA 780
CCACTGCACT CCAACCTGTG CGACAGAGCA AGATTCCTTC TAAAAAAAAA AAATTATATG 840
AATTTATGCA GAATGAAAAA AATCAAATTT TCAAGCCAGG AGTGGTGGCT CACACCTGTA 900
ATCCCAACAC TTTGGGAGGC CGAGGCGGGC GGATCACCTG AAGTCAGAAG TTAGAGACCA 960
GCCTGGCCAA CATGGTGAAA CCCTGTCTCT ACTAAAAATA CAAAAATTAG CCAGGTGTGG 1020
TGGTGGGCAC CTGTCATCCC AGCTACTCGA GAGGCTGAGG CACAAAAATT GCTTGAACCT 1080
GGGAGGTGGG AAGGTTACAG TGAACTGAGA TTGCGCCACT GCACTCCAGT CTGGGTGACA 1140
AGAGCAAAAC TCCATCTCCA AAAAAGAAAA AAAAAGACTA 1180