EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS105-39137 
Organism
Homo sapiens 
Tissue/cell
IMR90 
Coordinate
chr19:13266190-13268640 
TF binding sites/motifs
Number: 16             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
EWSR1-FLI1MA0149.1chr19:13268259-13268277CTTTCTTTTCTTTCTTCC-6.04
EWSR1-FLI1MA0149.1chr19:13268337-13268355CTTTCTTTCCTTTCTTTC-6.33
EWSR1-FLI1MA0149.1chr19:13268341-13268359CTTTCCTTTCTTTCTTTC-6.34
EWSR1-FLI1MA0149.1chr19:13268275-13268293CCTTCCTTCTTTCCTTTT-6.62
EWSR1-FLI1MA0149.1chr19:13268267-13268285TCTTTCTTCCTTCCTTCT-6.79
EWSR1-FLI1MA0149.1chr19:13268263-13268281CTTTTCTTTCTTCCTTCC-6.98
EWSR1-FLI1MA0149.1chr19:13268328-13268346CCTTTCTTCCTTTCTTTC-7.02
EWSR1-FLI1MA0149.1chr19:13268320-13268338CTTCCCTTCCTTTCTTCC-7.43
EWSR1-FLI1MA0149.1chr19:13268307-13268325CTTTCCCTCCCTCCTTCC-7.5
EWSR1-FLI1MA0149.1chr19:13268271-13268289TCTTCCTTCCTTCTTTCC-8.52
EWSR1-FLI1MA0149.1chr19:13268324-13268342CCTTCCTTTCTTCCTTTC-8
IRF1MA0050.2chr19:13268248-13268269TTTCTCTTTTTCTTTCTTTTC+6.13
IRF1MA0050.2chr19:13268242-13268263TCTTTCTTTCTCTTTTTCTTT+7
KLF5MA0599.1chr19:13266484-13266494GCCCCGCCCC+6.02
ZNF263MA0528.1chr19:13268312-13268333CCTCCCTCCTTCCCTTCCTTT-6.53
ZNF263MA0528.1chr19:13268303-13268324TTTTCTTTCCCTCCCTCCTTC-7.78
Number of super-enhancer constituents: 78             
IDCoordinateTissue/cell
SE_00539chr19:13260131-13268654Adipose_Nuclei
SE_00965chr19:13260231-13267594Adrenal_Gland
SE_01884chr19:13262645-13267546Aorta
SE_02410chr19:13262679-13267613Astrocytes
SE_02943chr19:13262763-13267379Bladder
SE_04421chr19:13259323-13267606Brain_Anterior_Caudate
SE_06231chr19:13259701-13267939Brain_Hippocampus_Middle
SE_07309chr19:13259928-13267777Brain_Hippocampus_Middle_150
SE_08538chr19:13266645-13267664Brain_Inferior_Temporal_Lobe
SE_09569chr19:13257341-13268468CD14
SE_10284chr19:13260733-13268995CD19_Primary
SE_11152chr19:13260138-13284995CD20
SE_12008chr19:13262714-13268389CD3
SE_13260chr19:13264787-13266749CD34_Primary_RO01480
SE_13717chr19:13260351-13267666CD34_Primary_RO01536
SE_14456chr19:13260146-13267907CD4_Memory_Primary_7pool
SE_15461chr19:13260306-13268179CD4_Memory_Primary_8pool
SE_15914chr19:13262261-13267577CD4_Naive_Primary_7pool
SE_16444chr19:13260512-13267685CD4_Naive_Primary_8pool
SE_16902chr19:13260377-13267853CD4p_CD225int_CD127p_Tmem
SE_17360chr19:13260267-13268844CD4p_CD25-_CD45RAp_Naive
SE_17844chr19:13260060-13268742CD4p_CD25-_CD45ROp_Memory
SE_18920chr19:13260019-13268779CD4p_CD25-_Il17-_PMAstim_Th
SE_19277chr19:13260238-13268565CD4p_CD25-_Il17p_PMAstim_Th17
SE_20072chr19:13260457-13268873CD56
SE_20795chr19:13260040-13267871CD8_Memory_7pool
SE_21526chr19:13260444-13267864CD8_Naive_7pool
SE_22040chr19:13260244-13267870CD8_Naive_8pool
SE_22453chr19:13260460-13268405CD8_primiary
SE_23096chr19:13262672-13267569Colon_Crypt_1
SE_23766chr19:13262692-13267074Colon_Crypt_2
SE_23766chr19:13267120-13267486Colon_Crypt_2
SE_24716chr19:13260272-13267304Colon_Crypt_3
SE_25952chr19:13260637-13267940Duodenum_Smooth_Muscle
SE_26584chr19:13260161-13268367Esophagus
SE_27635chr19:13260137-13267825Fetal_Intestine
SE_28568chr19:13260146-13267890Fetal_Intestine_Large
SE_29636chr19:13260531-13267686Fetal_Muscle
SE_31149chr19:13260734-13268335Fetal_Thymus
SE_31408chr19:13260172-13268677Gastric
SE_32780chr19:13266496-13267435H1
SE_34050chr19:13262672-13267496HCC1954
SE_34463chr19:13259325-13267638HCT-116
SE_34633chr19:13259304-13267691HeLa
SE_36380chr19:13260267-13266590HMEC
SE_37565chr19:13260374-13266995HSMMtube
SE_38051chr19:13260243-13267919HUVEC
SE_39215chr19:13262675-13266475IMR90
SE_40104chr19:13262671-13266546K562
SE_40852chr19:13262688-13268219Left_Ventricle
SE_42367chr19:13259409-13268436Lung
SE_44417chr19:13260243-13266489NHDF-Ad
SE_44845chr19:13260217-13266539NHLF
SE_47439chr19:13260265-13267889Panc1
SE_47495chr19:13262643-13267559Pancreas
SE_48450chr19:13260096-13267638Psoas_Muscle
SE_48836chr19:13262676-13267625Right_Atrium
SE_50086chr19:13260225-13268510Sigmoid_Colon
SE_51384chr19:13260369-13267723Skeletal_Muscle
SE_52361chr19:13262671-13268362Small_Intestine
SE_53312chr19:13260142-13268444Spleen
SE_54883chr19:13260112-13267898Stomach_Smooth_Muscle
SE_55159chr19:13262647-13267575Thymus
SE_55159chr19:13267601-13268356Thymus
SE_56946chr19:13262706-13267502VACO_400
SE_57396chr19:13262725-13267430VACO_503
SE_57920chr19:13263874-13267432VACO_9m
SE_60135chr19:13260128-13279366Ly4
SE_62354chr19:13259874-13293454Tonsil
SE_64811chr19:13262707-13266625NHEK
SE_65341chr19:13259845-13267646Pancreatic_islets
SE_66624chr19:13265171-13267365Jurkat
SE_67827chr19:13260056-13267567u87
SE_68590chr19:13260276-13279271TC71
SE_68591chr19:13260276-13279271TC71
SE_68592chr19:13260276-13279271TC71
SE_68593chr19:13260276-13279271TC71
SE_68683chr19:13260137-13267811H9
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 3             
ChromosomeStartEnd
chr191326632613267156
chr191326777913268208
chr191326703913268052
Enhancer Sequence
GGCAGGGACG TGCAGCCTCA GTTTCCTCAT CTGTGAAATG GGCCTCTAAG CAGCTTCTCC 60
ACCCGGCATT AGGTTTTTAA AAATGCCCAT TAGAGCCCTA GTTATTTTCT TGGGTCACTC 120
CCCAGCTCTA GAATAACCAC CCCGAAACGA GAAAGCCCTT TCAATATACC CCACGTAGGT 180
TTAAGAGTGG GGTTGTGGGC GTTGCCCCAG GGCGAAGGGA GGGGGCCTGT CGGGAAGACA 240
AAGGAGTCGC AGGTGCGGGG AGTGGTGGCG GCGGCAGGCG CCGGGAAAGC GCTCGCCCCG 300
CCCCGCCGAC GGCTGGCTCT GCCGCCGCAG GCTTCCCATG ACCCCAGGGG AACTGACCCC 360
GTGGCCACAG GGTAGAAGGA GGGGCAAGCC GGCCTCAGAA CGTCTGCTGG TGGAATCTGG 420
GAGCTTTGGC TCCCCTCCCG CCCAACCCAC ACCCCCTTTC CTCTCCTGTG TGGATTGTGA 480
AGGAGAGCTT CTCACCGTTC TCCAGCCAAG CTCGCCCCCA CGGCTGCCTG ATTCCTTCCT 540
GGGAACACGT GGGGGGACTT TTAAAAGGCG CCACCTACTC CGAGTCCTGA CCCACCCAAC 600
TCTCCCAGGG GACGTGGGGG CACTGGAGCC CCACACCGCA GGCGGTAGCT CAATGCACCC 660
GCGTCGGAGT TCCTCCCCCG CGAGCGTGGC AAGGCTCAGG GAAGTCCCGG GCCCCTGGGG 720
AGGGGGCCTT GCCGCGCATC CTGTCGCAGG AACCGCCGGG CCCTTCCTTC CGCGGGAAGC 780
GGCTTGGCCG ACCCCCGCCC CCGCCCGGGC CTCTTGGGGG TTTCCGGTGC CCGGCCACCG 840
TGGGGCTGGG GACTGAAAGT GATGGGACTG AAGATGGGGC TGGAACAAAC ACACTACAGA 900
CACATCCCCT TAAGACACAC CCATCCCCAA GACCCCACTG GACCCATCAG AAAAGGCAGC 960
ATTGAACCTT GTCACAGCAA ATAACATTGG TGAGGCCTGG ACTAATTGAT TGGACAATGG 1020
CTGTGAAAAC TAAAAAGGTC ACCCATCCTG TGACCAGCAG GTTCCAGCAG GGAACCCCAA 1080
GCCTGCTGCA GGAGACTCCA GAAAGGTGTT TGCTGCTGGC TTGTACTAAA TTGGCACAAA 1140
CTGCAAACAG CACAGCCTAC ATGCCCATCC TCCCAGATGG GTCCTCCCCA GAGGATAAAA 1200
GGCCGGAGCC AGACAGAACT ACACACACAG GCCACACAGA TAATTCGGTA CCAGAAACAT 1260
GATGCTGAGT GACAAAGGCC AGCTGCAGAA GTCAGGTAAG AAGCACATAT TCTGGGCCGG 1320
GCATGGTGGC TCATGCCTGT AATCCCAGCA CTTTGGAAGG CTGAGGTGGG CAGCTCACCT 1380
GAGGTCAGGA GTTCGAGACC AGCCTGATCA ACATGGTGAA ACCCCATCTC TACTAAAAAT 1440
ACAAAAATTA GCTAGGCAAG GTGGCAGGCG CCTGTAATCC CAGCTATCCG AAGGCTGAGG 1500
CAGGAGAATC ACTTGAACTC AGGAGGCAGA GGTTGCAGTG AGCCGAGATG GTGTCACTGC 1560
ACTCCAGCCT GGGCTACAGA GGAAGACTCT GTCTCAAAAA AAGAAGAAGA AGAAGAAGAA 1620
GAAGAACATA TTCTGGAGGG AGGGAAACAA CCAGGTCTAC TTTCGTTTTC TTGCTATGCA 1680
TCCTTGAGTG AGTCACTTGA CCTCTCTGGG CCTGTTTCCC CAACCGTATA CTGGGGACAA 1740
TAATAGTCCC TGCCTTTTAG GTTTGTTGTA AGGATTGAGA TTACACATGT AATCCTTACA 1800
ACAAACCTAG CAGAGTGCTG GCACGTAGAA AATGCTAAAT GTGCTGGGTG CCATGGTTCA 1860
TGCCTGTAAC CCCAAAAATT TAGGAGGCTG AGGTGGGAGG ATCACTTGAG GCCAAGAGTT 1920
TTCAGTGCAA TCATGGCTCA GTGTAGCCAT GTAGCCTCGA ACTCCCAGAC TCAAGCAATC 1980
CTCCTACCTC AGCCTCCCAA GCAGGTTGGA CCACAGGCTC AGGCACCATG CACAGCTAAT 2040
TTCTTTTTTT TTTCTTTCTT TCTCTTTTTC TTTCTTTTCT TTCTTCCTTC CTTCTTTCCT 2100
TTTTCTTTCT TTCTTTTCTT TCCCTCCCTC CTTCCCTTCC TTTCTTCCTT TCTTTCCTTT 2160
CTTTCTTTCA ACTAGAGTCT CTCTATCACC CAGGCTGGAG TGCAGTGGCT TGATTACAGT 2220
TCACTGCAGC CTCGAGCTCC TGGGCTCAGG CAATCCTCCC ACCTCAGCCT CTGGAGTAGC 2280
TGGGACTACG CCACCACACC CAGCTAATTT TTCTTTTTTT TCTTCTTCTC TCTCTTTTCT 2340
TCCTTGTCTC TTTCTTTTCT TTTCTTTTTT GTTTTTGACA GAGTCTCGCT CTGTTGCCAG 2400
GCTGGAATAC AGTGGTGCAA TCTCGGCTCA CTGCAACCCT GGCCTCCCGG 2450