Tag | Content |
---|
EnhancerAtlas ID | HS105-39114 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:13093830-13095520 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr19:13094556-13094575 | AGGCCAGCAGGGGGCGCGC | + | 6.8 | RREB1 | MA0073.1 | chr19:13095055-13095075 | GGTTTGGGTGTGGTTGTGGG | - | 6.13 | RREB1 | MA0073.1 | chr19:13095044-13095064 | TGGGTGTCTGTGGTTTGGGT | - | 6.2 | RREB1 | MA0073.1 | chr19:13095220-13095240 | TGGGTGTCTGTGGTTTGGGT | - | 6.2 | RREB1 | MA0073.1 | chr19:13095121-13095141 | TGTGTGTGTGTGTGTGGTGG | - | 6.41 | RREB1 | MA0073.1 | chr19:13095297-13095317 | TGTGTGTGTGTGTGTGGTGG | - | 6.41 | RUNX1 | MA0002.2 | chr19:13095049-13095060 | GTCTGTGGTTT | + | 6.62 | RUNX1 | MA0002.2 | chr19:13095225-13095236 | GTCTGTGGTTT | + | 6.62 | SPIC | MA0687.1 | chr19:13094723-13094737 | AGAAAGGGGAAGAA | + | 6.03 | ZNF263 | MA0528.1 | chr19:13094718-13094739 | AAGGGAGAAAGGGGAAGAAGG | + | 6.14 | ZNF263 | MA0528.1 | chr19:13094713-13094734 | GGAGGAAGGGAGAAAGGGGAA | + | 6.88 | ZNF263 | MA0528.1 | chr19:13094710-13094731 | GAAGGAGGAAGGGAGAAAGGG | + | 7.69 | Zfx | MA0146.2 | chr19:13093982-13093996 | CCCGCCTCGGCCTC | + | 6.01 |
|
| Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
SE_03137 | chr19:13093980-13094394 | Brain_Angular_Gyrus | SE_03137 | chr19:13094610-13097207 | Brain_Angular_Gyrus | SE_03859 | chr19:13093687-13094468 | Brain_Anterior_Caudate | SE_03859 | chr19:13094540-13097369 | Brain_Anterior_Caudate | SE_06678 | chr19:13093373-13097624 | Brain_Hippocampus_Middle_150 | SE_07717 | chr19:13093539-13097418 | Brain_Inferior_Temporal_Lobe | SE_29659 | chr19:13095067-13097280 | Fetal_Muscle | SE_31390 | chr19:13094935-13097245 | Gastric | SE_41557 | chr19:13094580-13095599 | LNCaP | SE_44758 | chr19:13093854-13094419 | NHLF | SE_50434 | chr19:13095031-13097276 | Sigmoid_Colon | SE_51076 | chr19:13094798-13097185 | Skeletal_Muscle |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr19 | 13094405 | 13094796 | chr19 | 13094000 | 13094441 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I012983 | chr19 | 13093992 | 13097240 |
|
Enhancer Sequence | CCCGGGTTCA AGCGATTCTC CTGCTTCAGC CTCCCGAATA GCTGGGACTA CAGGCGCGCA 60 CCACCATGCC CGGCTAATTT TTTGTATTTT AGTAGAGACA GGATTTCATC ATGTTGGGCT 120 GGATAGTCTC GATCTCCTGA CCTCGTGATC GGCCCGCCTC GGCCTCCTAA AGTGCTGGGA 180 TTACACTGCG CTCGGCCTCT CATCTGTTTC TTTCCCCATC CTTCTGTCTC TCAATCTCTC 240 CAGCTTTCTC CGGCCCTCCC AGTGTCTTCA TCTCTCCCCA TTTCTGTCTC TCCCCACCAG 300 GTCTCCCTAT CTCTTCCCAT CTCTCTCCGC ATCTCTGGGT CTCCCATCTC TGGTCTCTCC 360 CTGTCTCTCT TTTTTCTCTC CCCATTTCTC TGTCTCTCCC CATCTCCGTC TCTCTCATCT 420 CTGGTCTCTC TCATCTCTGG TCTCTCCCTG TCTCTCCTGT CTTTTTCCCT CCCCATTTCT 480 CTGTCTCTCC CCATCCCGGT CTCCCCGTCT CTGTCGGCCC GGGTGGGTCC GGGTGGGTCC 540 GGGACGGCCC GGCCCGGGCG CCGCGGCGAA CAATGCCCCA TTCACGCGGG CCGCCGGCGC 600 CATGGCAACG CGCCCGCCCC GCCCTCCCTG CGCGCGGGCC GCGCGTGCCA AGAGGATGCC 660 ATGGTTACGT CAGGCGCGTG CCCGTCGCGC GCGCCGCCGT CCCGCGCGCT CTTGCAGGGA 720 GGGGCCAGGC CAGCAGGGGG CGCGCGGCAG TAGCCTCTGC CCGGAGTCAG AAGGGGCGGT 780 CTTCCCCACT TCAAGGGGCC TTCAGCTGCT TAGTGCCTCA GTTTCCCCAT CTGTAAAACG 840 GGGGCGATGG GCAAAGCTAG ATCGGAGTGT GAAAGAGACA GAAGGAGGAA GGGAGAAAGG 900 GGAAGAAGGC GGCGGTGCTC CTTGGGGATG GTTGTGTGTC TGAGTTTGCA TGAGTCAGTG 960 GGTATATGTG TGTGCGAATT TGTGGGTCCA TGTTTGCGCG CTTGTGTGGG TGTTTTATGA 1020 GAAGTTGAGA AGTGGTTGGT TGTAATTTGG GGGTGACTTG GGGCCCATGT GTTTGGAAGT 1080 GTGTGTGTTT GTATTTGCAC ACTTGTGTGT GATGGTATTA GCCGGTATCA TTTGTGTGTG 1140 ATAATGTGTC CGTGTGTTTG TGGTCCTGTG ATTGTGCACC CCATGTTTGC CTGTCTGGTG 1200 TGTGGTGTGT ATAGTGGGTG TCTGTGGTTT GGGTGTGGTT GTGGGTTCGG GGAACTATGT 1260 GTCCCATGTT TGCATGTCTG GGGTGTGTGT GTGTGTGTGT GTGTGTGGTG GGTGTCTATA 1320 ATTTGGGTGT GGTTGTGAGT TCATGTAACT GAACCCCATG TCTGAATGTC TGGTGTGTGT 1380 ATGTGTATGA TGGGTGTCTG TGGTTTGGGT GTGGTCGTAT GGTTGTGAGT TCATGTGACT 1440 GTGCACCATG TTTGCATGTC TGGTGTGTGT GTGTGTGTGT GTGGTGGGTG TCTATGGTTT 1500 GGATGTGGTG TGTGTGGCTG TGTTTGCATG CCTGGTGAGT GTGTGTATGG GTGTATGTGT 1560 GTCTGTGATG GTGGATGGCT GTGTTGTTGG GTGTGATTGT GAGTTTGTGT GAATGTTGTT 1620 TGCGTGTCAC GGGGCCTGTG TTCACAAACT CACGTGTGCT TCTGTGTGGA ACTGGGTGTG 1680 GGTTCTGAGG 1690
|