EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-39096

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:12951880-12954340

Target genes

Number: 34
Name	Ensembl ID

CTD	ENSG00000261280
ZNF443	ENSG00000180855
ZNF709	ENSG00000242852
ZNF564	ENSG00000249709
ZNF791	ENSG00000173875
ZNF490	ENSG00000188033
MAN2B1	ENSG00000104774
WDR83	ENSG00000123154
WDR83OS	ENSG00000105583
DHPS	ENSG00000095059
FBXW9	ENSG00000132004
TNPO2	ENSG00000105576
C19orf43	ENSG00000123144
ASNA1	ENSG00000198356
BEST2	ENSG00000039987
HOOK2	ENSG00000095066
JUNB	ENSG00000171223
PRDX2	ENSG00000167815
RNASEH2A	ENSG00000104889
MAST1	ENSG00000105613
DNASE2	ENSG00000105612
GCDH	ENSG00000105607
AD000092.3	ENSG00000240616
SYCE2	ENSG00000161860
FARSA	ENSG00000179115
CALR	ENSG00000179218
RAD23A	ENSG00000179262
GADD45GIP1	ENSG00000179271
NFIX	ENSG00000008441
TRMT1	ENSG00000104907
NACC1	ENSG00000160877
STX10	ENSG00000104915
IER2	ENSG00000160888
CTC	ENSG00000213253

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr19:12952037-12952047	GGGGCGGGGC	-	6.02
RFX1	MA0509.2	chr19:12952179-12952195	TGTTTCCATAGCAACA	-	6.24
RFX1	MA0509.2	chr19:12952179-12952195	TGTTTCCATAGCAACA	+	6.26
RFX2	MA0600.2	chr19:12952179-12952195	TGTTTCCATAGCAACA	+	6.55
RFX2	MA0600.2	chr19:12952179-12952195	TGTTTCCATAGCAACA	-	6.62
RFX5	MA0510.2	chr19:12952179-12952195	TGTTTCCATAGCAACA	+	6.58
RFX5	MA0510.2	chr19:12952179-12952195	TGTTTCCATAGCAACA	-	6.6
TCF3	MA0522.2	chr19:12952492-12952502	AACACCTGCT	+	6.02
ZNF263	MA0528.1	chr19:12952788-12952809	GGAGGAAGAAGGAAGGGAGGA	+	8.01
Zfx	MA0146.2	chr19:12953350-12953364	CCCGCCTCGGCCTC	+	6.01

HEDD

Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1
Chromosome	Start	End

chr19

12953611

12953709

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I012840

chr19

12950896

12952710

Enhancer Sequence

GTGAGTCCCT CCCCTCCAGG GCCCCAGAAC CCTGGGCAGA CCCTCCCCAA CCACTGTCTG 60
GGCCGCCATC TGTTCTCCTC CTAATTGCAC CCGAGCTGGG GCCTGAGGGG ACCAGCGAGT 120
GCCCCAAGGT CTCAGCGGGA AGGAGCGCCT AGCCTTCGGG GCGGGGCCTA TAAGAAGGCG 180
GGGTCCAATC GCCGATCTGG AACGGGGAAG GCGGTGGGGC TCCCTTTGCG GCAGGTCGAA 240
AGCGCGTGCG CCCTGGGCGC GGGGTCTTAG TCTCTCCGAG CCTTGCTCTC CTGGCCAGGT 300
GTTTCCATAG CAACAGGACG GGGCAGCCAA GATGACGTGC GCAAGCGCAG ATTGCGCGAT 360
GCCTATCGAG GGACTCTTGG TCCCCGAGGT GGGGGAGGAC GACTAGGGCT GTTTCTCAAG 420
GGGAGGAATC TCAGGTTTCT TTCCAAGGGT CTCTTAGGGT TTCTGGGGTG TCCTTAAATG 480
AATTTTCTAT GGGCCTTTGG TGAAACTGGG GGAGGCAGAG AGGTTTCTCT GATGTTTTCT 540
GGAGAAACGT TTCTGGGAGT TTGGGCCTGT CTCTTTTTCT TTGAACTCTA TTCATTCTAA 600
AAATGGTGTC TAAACACCTG CTATGTTCTT AGGAGCTGGG CGTATGGGGT CAATGACGTC 660
CTGTCTCTAC CCTCTGAGTC GAATAGGGCA GGCAGGCCAG AGAATGGGGA TCAGTGCAAA 720
GGCTGATGAA GGCTGTGTTG TGAGAGTCAA AGGAGACTGT GAAGACAGAC AGCTCCCTTG 780
GGAAAGTGGG GGAACCGCCT ATTGACCATG GAATTTAGCT GAGGGCAATA GAGAGCCAGG 840
ACAAGGCTCT GGGATAGGGT CTCACATGTT TATCCGCAAG CGGGGAGGAC TGAGCGAGGG 900
GACTGCTGGG AGGAAGAAGG AAGGGAGGAG TCCAATAAAT GGGGTGTGTG TGTGTCCTTG 960
TAACTGTGCA AAGTGTGCTG GTGTGTGTGT GTGATTGTCA CTGTGTGAGG GATTACGTGC 1020
CTATGCAATG GCACGAGTCT GCGAATGTGA ACGTGTGAAC ATGTGTCTGT AGGATTGTAA 1080
GTGTCTGTGA ATATGTGAGA GGAGCAAGTC AGGTATGTCT CCAGGTGAGC GTGCAATCTG 1140
TGTGTGGGTG TAAGCGTGTG TGAGTGTGTG GCTGTGAGAT AGTAAACACA GAGTCACAGT 1200
GTTTACTGTC TCTCTCTCTC TCTCTCTTTT TTTTTTCTTT TCTTGAGACA GAGTCTCGCT 1260
CTGTTGCCCA GGCTGGAGTG CAATGGCGGG ATCTCGGCTC ACTGCAATTT CCGCCTTCTG 1320
GGTTCAAGCG ATTCTCCTGC CTCAGCTTCC CAAGTAGCTG GGATTACAGG CGCCTGCCAC 1380
CACGCCCGGC TAATTTTTGT ATTTTTAGTA GAGATGGGGT TTCACCAGGT TGGTCATGCT 1440
GGTCTCGAAC TTCTGACCTC AGGTGATCCA CCCGCCTCGG CCTCCCAAAA TGCTAGGATT 1500
ACAGGCATGA GCCACCGCGC CCGTCCAGTT TACTGTCTCA CAGCCACACG CTTACACATG 1560
CACATGCTAA TGTGTGTTGT GCACTCACAT GAGCACGCGC CGATGTGTGT CCCTGTGTGT 1620
GTGCATCTGC GTGCGAGTGT GAATGAGTGT GTCGCTGTGT GCAAGTTTCA ATGTGTGGTA 1680
GTGAGCGTGG GTGTCTGGAA CGTGCATCTG TGTGAATGTG GAAGTGTGGA GTATGTTTGG 1740
GTGAGTCTGT GTGTCCGAGT GTGAGTACTG AGTGGAAGCA CATGTGTCTA TAGGTGAGTG 1800
CATGTCTGGT CTTGCACGCG TGATTGTGCA TTAGTGTGTG AGAGTGTGAT ATTTGGGTCC 1860
ATGGATGGGA TAGTCAATAC GTGTGGGTGT CTGTGTTGAG GAGTCATGTG TGAGTGTGTG 1920
TCTTCGTGTG TGTGAAGTGT AAATGTGTGC ACTGCCAGTA TGTGAGCCTG ACCTGATAGT 1980
CACACCAACA TTAATGGATT TGGCTGCAAC AGTGACTGTG TCTGTGTGCA CGAGAGCATA 2040
AGGACACAAT ATTCTATGTC AGAACATGTT GGGGGGTGGG ACGGGTCTTT TTTCTCTGAG 2100
AAGATCCAAG GGTCTCCCTC AGAGCTTTCT CATGGAGAGT GTTCACTTGG GGGAAATTTC 2160
TAGAATCTCT CTGGAAAGGC TTCACTGGGT GGGGGCTTTT CCAGTTCTCG GTGTCCACTC 2220
TGAATGATAA GAGAGGGGAC CGTGGGGAGG AGAGTGGAGA CGGATCCTCC CTCCAATTCC 2280
CGGTGCCTGC CTGGAAGAGT CCCTCTTTAT CCCCTTGATT CTGAGGGCCT TGAGGAATCT 2340
TAGAGTGCAG ATATATTCCC CCAACCCCCA CCCTGGCCCT GGCCAGTGGC TTCACCCACA 2400
CCCTGAGGAG TTGGGGGACC GCTGGGGCCT TGTGGCCTCT GAGCACCTTG GCTGGGTTCC 2460