Tag | Content |
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EnhancerAtlas ID | HS105-38932 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:10870490-10873280 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr19:10870702-10870723 | GTGTGCTTTCTTTTTTCTTTT | + | 6.03 | Nr2f6(var.2) | MA0728.1 | chr19:10870935-10870950 | TGAACTCCTGACCTC | - | 6.22 | Nr2f6(var.2) | MA0728.1 | chr19:10871883-10871898 | TGATCTCTTGACCTC | - | 7.23 | POU4F2 | MA0683.1 | chr19:10873018-10873034 | CTGCATTTTTAATGAG | + | 7 |
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| Number of super-enhancer constituents: 31 | ID | Coordinate | Tissue/cell |
SE_03312 | chr19:10872319-10872780 | Brain_Angular_Gyrus | SE_03312 | chr19:10872971-10873522 | Brain_Angular_Gyrus | SE_04087 | chr19:10872610-10873810 | Brain_Anterior_Caudate | SE_04989 | chr19:10869289-10871189 | Brain_Cingulate_Gyrus | SE_04989 | chr19:10871741-10881548 | Brain_Cingulate_Gyrus | SE_05916 | chr19:10869208-10871211 | Brain_Hippocampus_Middle | SE_05916 | chr19:10871677-10881869 | Brain_Hippocampus_Middle | SE_06944 | chr19:10872057-10881599 | Brain_Hippocampus_Middle_150 | SE_08009 | chr19:10869725-10870977 | Brain_Inferior_Temporal_Lobe | SE_08009 | chr19:10871742-10881477 | Brain_Inferior_Temporal_Lobe | SE_11457 | chr19:10864897-10877892 | CD20 | SE_14773 | chr19:10869314-10871611 | CD4_Memory_Primary_7pool | SE_14773 | chr19:10871816-10877962 | CD4_Memory_Primary_7pool | SE_23074 | chr19:10869541-10871660 | Colon_Crypt_1 | SE_23074 | chr19:10871981-10875747 | Colon_Crypt_1 | SE_23814 | chr19:10872073-10872721 | Colon_Crypt_2 | SE_23814 | chr19:10872958-10873765 | Colon_Crypt_2 | SE_24803 | chr19:10872118-10872738 | Colon_Crypt_3 | SE_24803 | chr19:10872870-10873872 | Colon_Crypt_3 | SE_31454 | chr19:10869651-10871415 | Gastric | SE_31454 | chr19:10872008-10873919 | Gastric | SE_42575 | chr19:10869402-10871577 | Lung | SE_42575 | chr19:10872155-10873734 | Lung | SE_48918 | chr19:10872821-10873815 | Right_Atrium | SE_50068 | chr19:10869393-10871663 | Sigmoid_Colon | SE_50068 | chr19:10871848-10875773 | Sigmoid_Colon | SE_52382 | chr19:10869387-10871667 | Small_Intestine | SE_52382 | chr19:10871984-10875730 | Small_Intestine | SE_53539 | chr19:10869398-10871720 | Spleen | SE_53539 | chr19:10872678-10875640 | Spleen | SE_57460 | chr19:10873001-10873596 | VACO_503 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr19 | 10872364 | 10872655 | chr19 | 10870800 | 10871600 | chr19 | 10872242 | 10872597 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I010757 | chr19 | 10868478 | 10878291 |
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Enhancer Sequence | AAATGGGGCG GCCTGAGGTT CAGCAGGAAG TGGATGTGGA TGTGTGGTTG CCAGGAGTTG 60 CTGGGGGCGG AGGGTGGAAC TTGGGTCCTG GGCTGTCATT GGACATTGAA TTCACGTGTT 120 CCACATGTGT GAGGAAATTG AAAAACGGCT CAGTGAACAC TTACACACCC ACACTGCAAG 180 CCCTCAGCTG TGACCAGAAT GCCAGGTGCC ATGTGTGCTT TCTTTTTTCT TTTTTTTGAG 240 ACAGAGTCTC ACTCTGTCAC CCAGGCTGGA GTACAGTGAT GCTATCTTGG CTCACTGCAA 300 CCTCCACCTC CCAGGTTCCA GCGATTCTCC TGCCTCAGCC TCCCAAGTAG CTGGGATTAC 360 AGGTGTGACC CTCCATGGCC AGCTTTTTTT TTTTTTTTGT ATTTTTAGTA GAGACAGGGT 420 TTCACCCTGT TGGCCAGGCT GGTCTTGAAC TCCTGACCTC AAGTGACCCT CTCACTTCGG 480 CCTCCCTAAG TGCTGGGATT ACGGGCATGA GCCACCACAC CGGCCCCATG TGTGCTTTTC 540 ATGTGTTATA GATAACCCGA TTTTGCTGAA CGCTTTCAAA GTCAGTAGCA GACGTGGTGA 600 CACATCCATC CTTCACGCCC CAGTGCACCT CCCCATGCAA TAAAGACGCC TGTCTACAAA 660 GTCCCAGCAC CATGCCCCAG AGAACGAGTC ATTCCCGCAT GTCATCCACG TCCCAGTTTC 720 TACTCAGCAT GTCGCCAGTT GTCCCCCAGA TATCTGGCTG GTTTTATAGC TGCTCTGCTC 780 AATCCAATGC TATACTCTTT TGTAATCTCT TCTTCTCTTT TCATTAAAGC AGCCTCCCCA 840 TAATCACTTT TTTTATTTTT TTTAAGAGAC AGGGTCTCAC TCTGTTCCCC AGGCCGTGCA 900 GTGGTGTAGT CATAGCTCAC TGCGGCCTCG ACCTCCTGGG CCCAAGCAAT CCTCTCCAAT 960 CAGCCTCTCG GGTAGCTAGG ATTACAGGTG CACACACCAC CACACCCAGC TGATTTTTTT 1020 TTTTTTTTTT GGTAGAGATG GGGGTTATGT TACCCAGGCA GGTCTTGAAG TCCTGGCCTC 1080 AAGCAATCCT CCTGCGTCAG CTTCCCACAG TGCTGGGATT ATAGGCATGA ACCATCACAC 1140 CAGCCCTCTA CCATTGCTTT TTATTTTTTA TTTTATTTAT TTATTTATTT TTTGAGACAA 1200 AGTCTTGCTC TGTCGCCAGG CTGGAATGCA GTGGCGTGAT CTCGGCTCAC TGCAACATCC 1260 GCCTCCTGGG TTCAAGCGAT TCTCCTTCCT CAGCCTCCTG AGTTGCTGGG ACTACAGGTG 1320 TGTGTCACCA TGTCTGGCTA ATTTTTGTAT TTTTAGTAGA GATGGGATTT CACCATGTTG 1380 GCCAGGCTGG TCTTGATCTC TTGACCTCGT GATCCGCCCA CTTCGGCCTC CCAAAGTGTT 1440 GGGATTACAG GCGTGAGCCA CCGCGCCCGG CCACCATTGC TTTTTAATCA GACTTTGACT 1500 CTTAGGGAGA CCCAGCCTGT TGAATATAGT ATGGCCTATG TGTGGATTTT TTCCTGTTCT 1560 TTCCTTCCCT GATCTCAGTG TATTTCTATT CTTCCCACCC GAGGCTGACA TGAGGTGGGC 1620 GTATATCCCA GCTGGAAACC CCCTCGGGCC TCCTTGGGAA GGATCTTGGG TCAGAAGCTA 1680 GACCCGGGAG AGGTAAGGGT CTCCGTGCCC CTTCCCTGCT AATCTGCAAC ATCAGCTCTG 1740 GGCGTTCAAC ACTCAGTTTG TGTTAATGTC TTCTTGCGGC CCTTTTAAAT ACTCTCACAC 1800 TGGGAAGGCA GCTGACACAC ACACCCCCAT TCTACAGATG GGGAAACTGA GGCTTAGCCA 1860 TGCTGCCTGC CTTTCCAATG GGCCCCAGAT CTGGGACCTG CATCCAGGCA GATCTGACCT 1920 CAACGCCAGC TCTCAGCTTG GCCTCCCAAG ACTCCTCACT TTCGTCCTCT GGCCCCGCCC 1980 AACCTGGCAA GAAGGCGTGT CTCCAGTGAG AGACAGCAGC CGATGGGCCC ACCACCTCTT 2040 CTTTATGAGC TCTGCTATTT CGTACGCCAC CGATGGGCCA ATGGGCTGCC ACCTCTGGGT 2100 TCAGGCGTCC AATCAGCTGT GCCAGGAATG GGCAGCCCCA AAGTCCTGAG AGTCACTATA 2160 GAAATCAGTG TTGGTAGTTT TCTGTTTCTC ATTGAGCAGG ATGGGGACAG ATGTGCAAAC 2220 TGCATTTTTA TTTTATTTTA TTTTGAGACG GAGTCTCACT CTGCCACCCA AGCTGGAGTA 2280 CAGTGGCGGG TGATCTTGGC TCACTGCCAC CTCCGCCTTC CAAGTTCAAG CAATTCTCAT 2340 GCCTCAGCCT CCTGAGCATC TACAGGCATG AGCTACCACG CCCGGCTAAT TTTTTGTGTT 2400 TTTAGTAGAG ACAGAGCTTC ACCATGTTGG CCAGGCTGGT CTGGAACTCC TGAGCTCAAA 2460 TGATCTGCCC GCCTCTGCCT CCCAAAGTGC TGGGATTACA GGCGTGAGCC ACTGGGCCCG 2520 GCCACAAACT GCATTTTTAA TGAGTCCCTG GTGATGCTGC CAGTCTCTGG CCACACCACT 2580 GGGAGAGCCT GCCCTGCTTG GTTTAGGCTT GGAGCGGAGA CTGCCCAGGT TCCCAACCCA 2640 GCTCCTAGGG AGGGACCACC ACTGTGTTTC CTGTCTGGAC AGTGATGACA ATAACACCAC 2700 CTTGTTAGCC TTAAAGCACA CGTTATTTAC TACATGTCAG GGAGGAGGGG AGAGAAGCAG 2760 GCAGAGAGCC TTGGCCAGGA GGGAGCACAG 2790
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