EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-38854

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:10271090-10273290

Target genes

Number: 33
Name	Ensembl ID

CTD	ENSG00000239830
FBXL12	ENSG00000127452
UBL5	ENSG00000198258
PIN1	ENSG00000127445
OLFM2	ENSG00000105088
COL5A3	ENSG00000080573
C19orf66	ENSG00000130813
ANGPTL6	ENSG00000130812
PPAN	ENSG00000243207
P2RY11	ENSG00000244165
EIF3G	ENSG00000130811
DNMT1	ENSG00000130816
S1PR2	ENSG00000175898
MRPL4	ENSG00000105364
ICAM1	ENSG00000090339
ICAM4	ENSG00000105371
ICAM5	ENSG00000105376
ZGLP1	ENSG00000220201
FDX1L	ENSG00000167807
RAVER1	ENSG00000161847
ICAM3	ENSG00000076662
TYK2	ENSG00000105397
CDC37	ENSG00000105401
PDE4A	ENSG00000065989
KEAP1	ENSG00000079999
S1PR5	ENSG00000180739
ATG4D	ENSG00000130734
KRI1	ENSG00000129347
CDKN2D	ENSG00000129355
SLC44A2	ENSG00000129353
ILF3	ENSG00000129351
QTRT1	ENSG00000213339
DNM2	ENSG00000079805

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Crx	MA0467.1	chr19:10271111-10271122	AAGAGGATTAA	+	6.14
FOXF2	MA0030.1	chr19:10271669-10271683	TCAAGGTAAACAAA	+	6.7
Nr2f6(var.2)	MA0728.1	chr19:10273164-10273179	TGAACTCCTGACCTC	-	6.22

Enhancer Sequence

CCTCCTACAC AGGGAAAACA AAAGAGGATT AAAGGCTAAG AGAGTGTTTT ACACCCAGAT 60
AGTGCTTCGG TGTTAAGAAC TTTGTATAAG TGATTATCAT AAAACAGAGA GAAGGGGAGG 120
GAGGCAGTGA GAGGGCCAGC AGGTGAGCTC TGACTCACTC TACCATCTAA AGTCATAGAA 180
TACAAAATCT TATAGTCAGG CCCAGCACAG TGGCTCATGC CTGTAATCCC AGCACTTTGG 240
GAGGCCAAGG CACACAGATG ACTGGAGGTC AGGAGTTCCA GACCAGCCTG GCCAACATGG 300
CGAAATCACG TCTCTACCAA AAATACAAAG ATTAGCCAGG CGGGCACTTG TAATCTCAGA 360
TACTCAGAAG GCTGAGGCAG AAGAATTGCT TGAACCCGAG ACGTAGAGGT TGCAGTAAGC 420
AGAGATCATG CCACTGCATT CCAGCCTGGG CGACAGAGTG AGTGAGACTC CATCTCAAAA 480
TAAATGAATA AATAAATCTC ATAACCAAAG ACTTCCTGAA AAGATTTAGA GGAAAAGCCA 540
ATTTTTTAAA ACCTTAGCTT TCCTGTGTAA GTGGACACCT CAAGGTAAAC AAATAATTGG 600
CCAGGCACAG GGCCGGGCGC GATGGCTCAC GCCTGTAATC CCAGCACTTT GGGAGACCGA 660
GGCGGATGGA TCACGAGATC AAGAGATTGA GACCATCCTC GCCAAGATGG TGAAACCCTG 720
TCTCTACTAA AAATACAAAA ATTAGTTGGG CGCGGTGGCG CATGCCTGTA GTCCCAGCTA 780
CTCAGGAGGC TGAGGCAGGA GAATAGCTTG AACCAGGGAG ACAGAGGTTG CAGTGAGCCG 840
ATGTCGCACC ACTGTACTCC AGCCTGGCGG CAGAGCGAGA CTCTGTCTCA AAAAACAAAT 900
ACATAAGTAA ATAAATAAAT AAATAAATAA ATAAATAAAT AAATAAATAA CTGGCCAGGC 960
ACAGTGGCCC ATGCCTGTAA TTCCAGCACT TGAAGAAGCC CAGGTGGGAG GACTGCTTGA 1020
GCACAGGAGC TCAAGACCAG CCTGGGCAAC ACAGTAAAAC CCTGTCTCTA CAAAAATAGA 1080
AAGTTAACTG GGTGTAGTGC CATCTGCCTG TAGTCCCAGC TACCTTGAAG GCCCAGGTGG 1140
GAGGATTGCT TCAGCCCAGG AGTTTGCGGC TATGGTAGCT ATGACTGTAC CACTGCACTC 1200
CAGCCTCGAC AAGAGTGAGA CCCTGTCTCA AAAATAAATA CTAAAATGTA AAGGTAAGCA 1260
AACAATTGAT GAGGGGGTAT ACAGACCGAG TCATGTCCCC TGCAAAATTC ATATGTTAAG 1320
ACTAACCTGC TATGTGACTG TATTTGGATG TAGAGTCTTT AAGAGACAAT TATGGTTAAA 1380
TGAGGTAATA AAGGTGGGGC CCCATCCAAT AAGACCAATG TCCTTGTATT TTTTGTTGTT 1440
GGTTTTGAGA CAGAGTCTTG CTGTGTCCCC AGCCTGGAGT GCAATGGTGT GATCTCGGCT 1500
CACTGCAACC TCTACCTCCT GGGTTCAAGT GACTCTCCTG CCTCAGCTTC CCAAGCAGCT 1560
GGGATTACAG GCCCCTATCA CCACAACTGG CTAATTTTTG TATTTTTAGT AGAGACAGGG 1620
TTTCACCATG TTGTCCAGGC TGGTTTCAAA CTCCTGACCT CAGGTGATGC GCCTGCCTTG 1680
GCCTCCCAAA GTGCTGAAAA GACAGGCGTG AGCCGCTGTG CCCAGCATTT TTTTTTTTTT 1740
TTGAGACAGA GTCTTGCTCT GTTGTCCAGG CAGGAGTACA GTGGCACGAT CTCAGCTCAC 1800
AGCAATCTCC GCCTCCTGGG TTCAAGCAAT TCTCATGCCT CAGGCTTCCA AGCAGCTGGG 1860
ACTACAGGCA TATGCCACCA CGCCCAGCTA ATTTTGCTGT GTCCCCAGCC TGGAGTGCGA 1920
TCTCGGCTCA CTGCAACCTC CACCTCCCAG GCTCAAGCGA TTCTCCTATC TCAGCCTCTC 1980
GAGTAGCTGG GACTACGGGC GTGCACCACC ATGCCCAGAT AATTTTTGTA TTTTTAGTAG 2040
AGACAGGGTT TCACCATATT GGTCAGGCTG GTCTTGAACT CCTGACCTCA TGTGATTCAC 2100
CCGCTTCAGC CTCTCAAAGT GCTGGGATTA CAGGCGTGCG CCACCACGCC CAGTCTTCTT 2160
TTTCCTAAGA CCAGCCTGGG CAACATGGCG AAACCCCGTC 2200