| Tag | Content |
|---|
EnhancerAtlas ID | HS105-38778 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:8605440-8606060 |
Target genes | | Number: 13 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Lhx3 | MA0135.1 | chr19:8606028-8606041 | AGCTAATTAATTA | - | 6.09 | | Lhx3 | MA0135.1 | chr19:8606035-8606048 | TAATTAATTATTA | + | 6.18 | | Lhx3 | MA0135.1 | chr19:8606031-8606044 | TAATTAATTAATT | + | 6.78 | | Lhx3 | MA0135.1 | chr19:8606032-8606045 | AATTAATTAATTA | - | 6.78 | | POU6F1 | MA0628.1 | chr19:8606033-8606043 | ATTAATTAAT | + | 6.02 | | POU6F1 | MA0628.1 | chr19:8606033-8606043 | ATTAATTAAT | - | 6.02 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I008540 | chr19 | 8605581 | 8606246 |
|
Enhancer Sequence | AAAATTAGCG GGGCATGATG GTGGGCGTCT ATAATCCCAG CTACTCGGGA GGCTGAGGCA 60
GGAGAATCGC TTGAACCCAG GAGGTGGAGG TTGCAGTGAG CCGAGATCGT GCCACTGCAC 120
TCCAGCCTGG GCGGCAGGGT GAGAGACACT GTCTCCAAAA AAAAAAAAAA AAAATCGGAT 180
TGTGGTGATG GTTGCGCAAT TCTGTGAATT TGCTAAACGT CATGGATTGA GACACTGCTT 240
AAAGTGGGTG GATTTAATGG TAAGTGCTGC TGAAACCCTT ACGTGCACAT GGATCCCTGG 300
GAGGCATGGG TGCATCCTGG CTTAAAGATC AGGTTAGGTT CCGATAGTTC TAAACCTGAT 360
TGTTCAGATT CTGATAGTTC AGAATCAGAT GCAGATTCTG ATTCTGGAGG TCTGGGGTGG 420
AGTTTGAGGT TCTGCCTTTT TTTTCCCCTC AGAGATAAGG TCTGTTGCCA AGGCTGGAGT 480
GCAGTGGTGC AATCACGGCT CACTGTAGCC TCCACCTCCT AGGCTCAAGT GATCCTTCTA 540
TCTCAGCCTC CCGAGTAGCT GGGACTATAG GCATGTGCCA CCACACCCAG CTAATTAATT 600
AATTATTATT ATTTTTGCTG 620
|
