| Tag | Content |
|---|
EnhancerAtlas ID | HS105-38716 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:7918220-7918960 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr19:7918291-7918310 | CGGCCGCTAGGGGGCGGGC | + | 6.07 | | KLF4 | MA0039.3 | chr19:7918723-7918734 | GCAGGGTGTGG | - | 6.62 | | ZEB1 | MA0103.3 | chr19:7918359-7918370 | CCCACCTGCGC | + | 6.62 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_04715 | chr19:7913463-7919006 | Brain_Anterior_Caudate | | SE_05271 | chr19:7913261-7919116 | Brain_Cingulate_Gyrus | | SE_06136 | chr19:7908807-7927696 | Brain_Hippocampus_Middle | | SE_07322 | chr19:7912291-7919211 | Brain_Hippocampus_Middle_150 | | SE_08333 | chr19:7913202-7919118 | Brain_Inferior_Temporal_Lobe | | SE_34571 | chr19:7917762-7918981 | HCT-116 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I007852 | chr19 | 7917705 | 7918993 |
|
Enhancer Sequence | TGAGTCCAGG GGCCCAGGGG CGGGGACAGG GATGGGAGGC CTTTGGGGGC TGCCCTCCGT 60
ACTCTAAAGA TCGGCCGCTA GGGGGCGGGC CTTCCCAGCG CACAGGCGGA CCCGGCGGTC 120
CTTGGCGGAC AGGCCTCCGC CCACCTGCGC CGTCCTTCAC CTGTTAGGCC AGCTGTGAGC 180
GCCTCCCCCG CCTGACGCCG CGGTAACCAA GACAGTCAAG GTCCCTGCCC CGCTGGGCCG 240
CCCAGCGTCA TGGGGAAGCA ATCAATAAAC CACTGAACTA GAGTGCGGAC TCTAAATGCT 300
CTGGACAAGG ATGTGCACGC GGTGGGCAAG GCTGACTTGG GCAGAGGCTC CGGGCCCAGG 360
GTGTCGAGGG CTAAAGGCCC AGGGCAGCAG CGTGCCTTGG GGGCTGGAGG AATTCCAAGA 420
AGGTTGCAGT GGAGGACCCC GCAAGGGGAC CGCCCTCTGG GGAAAGATGG AGCACGCAGG 480
GCCCAGACAC CAGGGTGTGT AGGGCAGGGT GTGGGCACTC ACCCGGGGCC CCTGGTTCCT 540
GGGGCAACTG GCCCACCAGC CCTGCCAGGT CAGGGGGTTT CCTGAGTGTG CAAAGCTTCT 600
CTCTCCTTCC TTGCGCATTC TTCCCTTTAC ACGTGATTTT AGTTATTTAC TCAACAAGCA 660
TTTATTGCCG GGCGCGATGG CTCATGCATG TAATCCCAGC ACTTTGGGAG GCGGAGGCAG 720
GTGGATCACT TGAGGTCAGG 740
|
