| Tag | Content |
|---|
EnhancerAtlas ID | HS105-38666 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:6752760-6753460 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Hnf4a | MA0114.3 | chr19:6752847-6752863 | AGAGGACTTTGACCCA | - | 6.42 | | KLF16 | MA0741.1 | chr19:6752787-6752798 | GGGGGCGGGGC | - | 6.02 | | KLF5 | MA0599.1 | chr19:6752788-6752798 | GGGGCGGGGC | - | 6.02 | | NR2C2 | MA0504.1 | chr19:6752907-6752922 | CGGGGTCAGAGGGGA | + | 6.21 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_23570 | chr19:6751950-6755017 | Colon_Crypt_1 | | SE_24935 | chr19:6751934-6754691 | Colon_Crypt_3 | | SE_50473 | chr19:6751517-6754518 | Sigmoid_Colon | | SE_54228 | chr19:6753217-6754106 | Spleen | | SE_59441 | chr19:6735396-6754227 | Ly3 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I006751 | chr19 | 6751214 | 6754561 |
|
Enhancer Sequence | AATCCTGGAA GCAAGGTCAG GTGGGCTGGG GGCGGGGCCC AGGCGCCCGC CTCGCCCCTC 60
CCAACCTCCC GGCACCTTCC TTTCCCCAGA GGACTTTGAC CCAACAGGGG CCCGGGAGGG 120
ACCTGCCCCA CCTGCGGGAT GACTAGGCGG GGTCAGAGGG GAGGGGGCTT CCAGCTCTCT 180
GCAGGAATGG GGGTGGGGTG CCTGAGGGGC TCTACCGCAG TGCAATGGGG TGGCCTGTTC 240
CAGGTGCCAG ATCCTGGAGG TCCCGCCTTA GGGGCTGTGC CTGGACGTGG GGCTGCCCCG 300
AGGACGGGAT CCCAGGTTGT CGGGGAAGGT GGGGGGATCT TGCCGGGTGG GCTGCCCTAG 360
GATAGGACGG AGGAGTCGTT TTGGAGGGAG CAGGGCGTTC TTGGGGATCG AGATCCCTGG 420
GGGACGGGAT CGTCTTAGGT GGGAAGGGGG AGTGGGGACC CGCGGAGGTG GCTCTGGGGG 480
CAGGACAGCC CGTTTTGAGG TGGACGGCCC TGTTCCTATC AATACCGCTG GATGCAGCGT 540
TTGCTTGGGG TGAGAACCTT CCTGGAGTGG AGCCGTCCCA GTTTGGGTGG GGCTCCGGGA 600
GGCGTGGCGA GAGGCTCCCC TCCTGGGACA GGCTGGGTTT GGGGGATCCG GTTAGAACCT 660
GCAGGGTGCT CTGAAGTCTG CAGTCCAGCG CAGAGGGAAC 700
|
