Tag | Content |
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EnhancerAtlas ID | HS105-38661 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:6515930-6517710 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr19:6517054-6517073 | GGTCCACCAGGGGGCGCCC | + | 7.12 | EBF1 | MA0154.3 | chr19:6517287-6517301 | AGTCCCTGGGGACT | + | 6.28 | EBF1 | MA0154.3 | chr19:6517287-6517301 | AGTCCCTGGGGACT | - | 6.93 | KLF14 | MA0740.1 | chr19:6516124-6516138 | AAGTGGGCGGGGCC | - | 6 | KLF14 | MA0740.1 | chr19:6516196-6516210 | AAGTGGGCGGGGCC | - | 6 | SP1 | MA0079.4 | chr19:6516044-6516059 | AATGGGCGGGGCCTG | - | 6.28 | SP1 | MA0079.4 | chr19:6516125-6516140 | AGTGGGCGGGGCCTG | - | 6.76 | SP1 | MA0079.4 | chr19:6516197-6516212 | AGTGGGCGGGGCCTG | - | 6.76 | SP2 | MA0516.2 | chr19:6516043-6516060 | AAATGGGCGGGGCCTGG | - | 6.05 | SP2 | MA0516.2 | chr19:6516227-6516244 | AAGTGGGAGGGACTAAG | - | 6.87 | SP2 | MA0516.2 | chr19:6516124-6516141 | AAGTGGGCGGGGCCTGG | - | 6.9 | SP2 | MA0516.2 | chr19:6516196-6516213 | AAGTGGGCGGGGCCTGG | - | 6.9 | SP4 | MA0685.1 | chr19:6516042-6516059 | GAAATGGGCGGGGCCTG | - | 6.8 | SP4 | MA0685.1 | chr19:6516123-6516140 | GAAGTGGGCGGGGCCTG | - | 7.51 | SP4 | MA0685.1 | chr19:6516195-6516212 | GAAGTGGGCGGGGCCTG | - | 7.51 |
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| Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
SE_04576 | chr19:6515779-6517785 | Brain_Anterior_Caudate | SE_05428 | chr19:6514842-6518872 | Brain_Cingulate_Gyrus | SE_06410 | chr19:6513667-6518095 | Brain_Hippocampus_Middle | SE_07190 | chr19:6513827-6517835 | Brain_Hippocampus_Middle_150 | SE_08344 | chr19:6514848-6518047 | Brain_Inferior_Temporal_Lobe | SE_59187 | chr19:6504315-6557596 | Ly3 | SE_60909 | chr19:6515936-6539276 | DHL6 | SE_61349 | chr19:6504438-6557049 | HBL1 | SE_62127 | chr19:6504461-6555983 | Toledo |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr19 | 6516049 | 6516950 | chr19 | 6517219 | 6517572 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I006515 | chr19 | 6515621 | 6517670 |
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Enhancer Sequence | TGGACGACAA GAGCAAAACT CCGTCTCCAA AAAAAAAAAA AAAAAAAAAA GCAGAAAACA 60 GAGTGGGGCA CGAAGAGTCT CCAGGCCCTA TTCCCAGGTC ACTAATGATT GGGAAATGGG 120 CGGGGCCTGG GAGAATGACA GGGAGGTGTG AGGGACTGAG GAGTGGGCAG GGTCTGGGAG 180 GCTGATAACA GGGGAAGTGG GCGGGGCCTG GAGATAATAT TGGGAGGAAC TGTGGCGTGG 240 GAAGGGCCTG GAGCGGACAG CAGGGGAAGT GGGCGGGGCC TGGGGAGAAT GACAGGGAAG 300 TGGGAGGGAC TAAGGAGTTA GCAAGGGCTG GGAGACAAAT AACTATGAAG TGGGCGGAGT 360 CTAGGGAGAA TGACCGTGGG GTAGGGGAAC TGAGGAGTGG GCTGGGCCTG GGAGTCTGCT 420 GGGGAAGCGG ACGGTCCTCG AGAGAATGAC AGGAAAGTGG GAAGGACTGA GGAGTGGGCA 480 GAGCCTGAGA GGCAAACGGA TGGGTACGAG GGCGGGGCCT GGGGAGAAGC TAGGGAGGTG 540 GGAGGCGGAT GACAGCGGAA TGGGGCTTCG GTAGACTGAC AGGATCAGTC GTGGAAGGGG 600 CGGGCCCATC TTTCTCTTGA ACCCGCGAGC CAAAGCCACG TTGGTGCTGG TGATCATCCA 660 GGCTGAGCGC TGGGCATTCC CAGTCTCGGG CGATTTCTTG GCGTTACTTC CAGGCTGAGA 720 GCCATGACTA GGCGAGCTTC GGCCGTGGGA CCGAAGACCT CCCACCCTCA GCACTCTAAC 780 CTCCCCGACC CTGCCCTCGC TGTGCCTCGT TGGGAATCCG CCTCCGGGGT CTTCCGCGGT 840 CCAGGAGCCG CACCTGCCGG GTGGAGACGC GGGGCTGGCT GGGGTGCGGG AGTAGGAGGT 900 CTTCGGTCCA ACCGCCTCCA ACCCATTCCT GCTTCCGACG TTCTGTTCCC GCGCTTAATG 960 CCCTGCCCGA TCCAGTTCCG GCCTCCCATC TCCCCTTCCC GCGTCTCCAC GCTCTTTCCT 1020 TCCCCGGTTC TGCCGTGAAT GCTCCCAAGT CCTAGAGCAC CGGAACTCCC CGCGCGCCTT 1080 GGCTCCTGGG CCCCAGCTCC GTGCAGTCCT GGACTGGGGC TCCAGGTCCA CCAGGGGGCG 1140 CCCGCTGCCC AAGCTGGGTA TCGCTGCGGA GAAAAGGGGC CCAGAGTGAT TGTTCCTCAG 1200 GGGAGGGAGG GGGAGGTCCC CAGAGGGAAG GGCCTGAGTT TCCTCTTGGG GGATGGATCC 1260 TAGGTGGTCT GAGGGGTGAG TCCTGGGTTC CCTGGCGGGA GTGGATCTTG GGTGGTCCTC 1320 TGTGGGTACA GGGTGGAACT TGGGTGTTCT GAGGGGTAGT CCCTGGGGAC TCCTCTGGGA 1380 GCGGGGCAGA CCTTGGATGG TCGTAGGATT GGACCTGGAC CTCTGTGTGT GTGATTGTGC 1440 ATGCCCATAA CGTGTGTTCT TGCGTTATGT CTATGACTAG CCATGGTGCC TGCCATGTAT 1500 GTGTATCTAC GATTGTGTCT TTGGGTGTCT GTCTCAGTGT GTAACCGTGT ACGTGTGTGT 1560 TGTGTACCTC CATGTCTGTT TTGGTATGTG TGTGATGGTG TGTCTGTGTT GGTGTGTTCT 1620 AGTCTCGGTG TGTTTGGTTA TATGCCCTGA ATATATGTCT CTTGTGTCCT TGTGTGTGTC 1680 TGTTGCTAGC TTTTTTTTTT TTTTTGAGGC AGAATCTTAC TCTGTCATCC AGGCTGGAGT 1740 ACAGCGGCGC CATCTTGGCT CACTGCAACC TCTGCCTCCC 1780
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