| Tag | Content |
|---|
EnhancerAtlas ID | HS105-38619 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:5889230-5890690 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr19:5889243-5889264 | AAAAAGAAACAAAAACAAAAA | - | 6.08 | | ZNF263 | MA0528.1 | chr19:5890122-5890143 | AGGAGAGGGAGGGGAGGGAGA | + | 6.06 | | ZNF263 | MA0528.1 | chr19:5890100-5890121 | GGAGCAGTGAAGAGGGGAGGG | + | 6.07 | | ZNF263 | MA0528.1 | chr19:5890126-5890147 | GAGGGAGGGGAGGGAGAGGAG | + | 6.8 | | ZNF263 | MA0528.1 | chr19:5890117-5890138 | AGGGGAGGAGAGGGAGGGGAG | + | 7.35 | | ZNF263 | MA0528.1 | chr19:5890120-5890141 | GGAGGAGAGGGAGGGGAGGGA | + | 7.88 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr19 | 5889633 | 5889941 | | chr19 | 5889952 | 5890095 | | chr19 | 5890231 | 5890592 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I005889 | chr19 | 5889394 | 5890118 |
|
Enhancer Sequence | AAAGAAAAGA AAAAAAAAGA AACAAAAACA AAAACAAAAA ACAACAAATT AACTGAGTGT 60
GGTGGTGGGC ACCTGTAATC CCAGATACTC GGGAGGCTGA GGCTGGAGAA TCGCTTGAAC 120
CCCTAGGCGG CAGAGACTCA GTGTCAAAAA AAAAAAAAAA AAAAAAGTCT CATGGGACTC 180
CCTTCACATA TGTGGTCCGT CAGTGACCGA AATGCTGTTA TACTGCACAT GACTGTTTGC 240
TGAATGAACT CTGAGTCTTG CCCCCGGGTC TGGAGGGCTT CTCTTCCCGT GCCTTCCCGC 300
ACTCCACTGC AGCCATCATC TCATGTGGGG AGAGTGAGAA GGACCCTGAT CCCCCTCCGA 360
GAGCCTATAC CACCCAGGCA GCAAAGCAGG GCCAGGCAGG GTGCACAGCC ACCCCCAAGT 420
GGTTCTCAGG CCCCACCTCT GGACCTCCTA CCCTTTGCAG ACCTGGAGAT TCATTCATTT 480
GTTTATCCAT TCATTCATTC CACACATAGT TCTGGAGCCC TGCTGCGTTC CTCGGCTGGG 540
TGCCGGGGTG TAGGCAGAGG ATATAACAGC CAGGATACGT CCCAGTCCTC AAGGAGGTGC 600
ACATAAATAA CACACGTGAT GGTGACGTGG GACTTAGAAA CTGGCAGGGG CTACGGGCAA 660
AACTAGAAGG CAAATGAGTG TGGAGTGCTG GTGGCCTGGG GACGGGGGAT GAGGAGGTGG 720
CTTGTGAGCT GAGAATTGAA GGAGGTGAGG GGTGAGCTTG GGGACATCTA GGGGACAGGC 780
ATTGCAGGCA GAGGGTATGG ACTATGCAAA GGCCCTAGGG CAGGACTGTG CCAGGGGTTT 840
TGGAGGAAGA GTGAGGAGGC TGGTGGGGCT GGAGCAGTGA AGAGGGGAGG GGAGGAGAGG 900
GAGGGGAGGG AGAGGAGGGG TCGGGACACA CAGGGCATAG TGGGCTGTAG AGAGGATTTG 960
GGCTTTTCCC CCAAGTGGGG TGGGAGCCAT GGAGGACTGT GGGCAGGGGA GGGGCGGGAC 1020
CTGACTTAGG GGCTCACAGG CGCCTTCTGG CTCAGGGGGT AGCCGGGTGA CCAGGGCAGA 1080
GGGGACTACG CTTGTCGTGA TGATGGAATC AGACTAGAGG CAGATCTGGG ACAGATTCTG 1140
AAGGCAAAGG GGCTCGAGAT GCGGGGAGGG CGGGAGCAGC TCTTCAGTCC CAGGAGGGGC 1200
ACACATCAGC CCCGTGGGGT CTTCTCAGCT GTGTCCCACC CCAATCATGT CAAACACATT 1260
TATAGGAGCC CACAGCCCAC ACTCAACACA AGTTTAAAGG AGTACAGTTG TGCTCAAGTT 1320
GGCAGCGAAA ACACCTTCCT TTCTCAGTGA GGTATTTTCT TTTTTTTTTT TTTTGAGACG 1380
GAGTCTCACT CTGTCGCCCA AGCTGGAGTG CAGTGGCGTG ATCTTGGCTC ACTGCAAGCT 1440
CCGCCTCCCG GGTTCACGCC 1460
|
