Tag | Content |
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EnhancerAtlas ID | HS105-38470 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:3450560-3452470 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HOXA13 | MA0650.2 | chr19:3450885-3450896 | GTTTTATTGGC | - | 6.14 | MEF2B | MA0660.1 | chr19:3451043-3451055 | GCTATAAATAGT | + | 6.18 | MYCN | MA0104.4 | chr19:3450976-3450988 | GACCACGTGGCC | + | 6.52 | MYCN | MA0104.4 | chr19:3450976-3450988 | GACCACGTGGCC | - | 6.52 | NFE2L1 | MA0089.2 | chr19:3451114-3451129 | ATATGACTCAGCCAT | + | 6.1 | Nr2f6(var.2) | MA0728.1 | chr19:3451898-3451913 | GAGGTCAGGAGTTCA | + | 6.22 | Nr2f6(var.2) | MA0728.1 | chr19:3451547-3451562 | GAGGTCAGGAGGTCA | + | 7.19 | RARA | MA0729.1 | chr19:3451547-3451565 | GAGGTCAGGAGGTCAAGG | + | 7.37 |
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| Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
SE_00856 | chr19:3450572-3452009 | Adrenal_Gland | SE_00856 | chr19:3452036-3453184 | Adrenal_Gland | SE_02181 | chr19:3450593-3451954 | Aorta | SE_05799 | chr19:3452195-3455568 | Brain_Hippocampus_Middle | SE_26532 | chr19:3450617-3451934 | Esophagus | SE_31377 | chr19:3450619-3451935 | Gastric | SE_38681 | chr19:3450178-3453041 | HUVEC | SE_40606 | chr19:3450341-3453158 | Left_Ventricle | SE_42110 | chr19:3450449-3452029 | Lung | SE_42110 | chr19:3452182-3453208 | Lung | SE_48051 | chr19:3450484-3451939 | Psoas_Muscle | SE_48051 | chr19:3451953-3455385 | Psoas_Muscle | SE_48561 | chr19:3450578-3451921 | Right_Atrium | SE_53320 | chr19:3450568-3451762 | Spleen |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr19 | 3450938 | 3451227 | chr19 | 3450666 | 3451466 | chr19 | 3451656 | 3451899 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I003450 | chr19 | 3450363 | 3454284 |
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Enhancer Sequence | AAGAATTTCT TGAACCCGGG AGGCGGAGGC TGCAGTGAGC CAAGATTGTG CCATTGCACT 60 CCAGCCTGGG CAACAGAGCA AGACTCCATC TCAAAAAAAA ACAAAACAGA ACAAACAAAA 120 AATCACCTTC CATGGTTGCC ATTGGGATTA AGGGGGGTGA ATTGTAGGAA GCCTCAAATA 180 TTGCTTACCA CCCCATGTTC TAGTGATCAA CTATTTAGTT CTTTACACAG TCATGCACAC 240 AGAGAGGCAG TCCCAAATCA AAGCAGCCAT TTGGGCCAGG GGTCAGCAAA CGCTGGCCCC 300 CTGGTTGCCT GTTCTTACGA ATAAAGTTTT ATTGGCAAAC AGCCACGACC ACGTCTTTGT 360 ATATGTCCTG TGGCAGCTCT CACCCTGTCT TGGCAGGGCT GAGTAATTAC AGCAGAGACC 420 ACGTGGCCAA AAGCCAAAAA TATTTACTAT CTGGCCAGAG GCTGTGGAGA TGAGGGAGTG 480 ACTGCTATAA ATAGTGAAAA TACTAAAAAT CACTGAACTG TTTAGAAAGA GGAAAAGGCA 540 GGCACCACAA TAGAATATGA CTCAGCCATG AAAACGCACG AGGCTCTGAC GCAGGCCACC 600 TTGAGGACGT CATGCTCAGT AAGAGAAGCC AGACAAAAAG GCCACACAGC ATGTGATCTC 660 ATTTCTATGA AATGTCCAGG ACAGGGCCAG CCACAGAGGC AGGAAGGGGA TGTATGGGTG 720 CTGGGGCTGG GGGAGGAGGT GAGGAGTGAC GGCTGATGGA GACGGAATTT CTTTATGTGC 780 TGGAATTAGG CCGGGCACAG TGGCTCATGC CTGCAATCCC AGCACTTTGG GAGGCTGAGG 840 TGGGTGGATT GCTTGAGTCC AGGAGTTTGA GACCAGCTTG GGCAACATGA TGAAACCCCA 900 TCTCTACTAA AAATACAAAA AATTAACCAG GCGTGGTGGC ACACGCCGGC AGTCCGTGCT 960 ACTCAGGCCG AGGCAGGAGG ATCACCTGAG GTCAGGAGGT CAAGGCTGTA GTGAGCCATG 1020 ATCATGCCCC TGCACTCCAG CCTGGGTGAC AAAGCGAGAT TCTATCTCTT AAAAAAAAAA 1080 AAAAAAGATC ACTATTCAGC CATTTGCAGA AAGAGCTTGC CAACCCTAGA TTTATAGTGT 1140 AGACTGTGGG GCCAGATGGG CTGGGTTCAA ATTCCCGGTC TGCCATCTGA TGCCGTGTGG 1200 CCCCAGGCAG GTGACACATC CCCTGAAGGC CACCCTGTCA TCCTCTGTTT AAAAAAAAAA 1260 AAAAAAAGAC GGGGCCAGGT GCAGTGGCTC ACGCCTGCAA TCCCAGCTCT TTGGGAGGCC 1320 AAAGTGGGCG GATCACCTGA GGTCAGGAGT TCAAGACCAG CCTGGCCAAC ATGGCGAAAC 1380 CCCATCTCTA CTAAAAATAC AAAAGTTAGC CAGGCATGGC GGCGTGCACT TGTAATCCCA 1440 GCTACTCGGG AGGCTGAGGC AGAATTGCTT GAACCCAGGA GGTGGAGGTT GCAGTGAGCT 1500 GAGGTCATAC CACTGCACTC CAGCCTGGGT GACTGTCTCA AAAAAAAAAA AAAAAAAAAA 1560 AGACCAGGCT CAGTGGGTTA CACCTGTAAT CCCCGCACTT TGGGAGGCCT AGGAGGGAGG 1620 ATCGCTTGAG CCCAGGAGTT CGAGACCTGC CTGGGCAACA TAGCAAGACC CCCACCTCTA 1680 CAAAACTAAA AAATTAAATT AAAACACAAG GATAATATCA CAGCCCCAGT GGGGTTGCCG 1740 TGGGAGTCGG GGAATTTGGG TGTCAATGTG GTCAGTGCTG CTGGGTTTTT TTGGTGGTTA 1800 TTGTTACTAA ACGCACTGAG ATGCCGGCAG GAATGACACC CACAGACACA CAGTCACACG 1860 GTCACAGAGC AGACCGGCTG GAGCCCCCAA GTAACCCCCG CTTCCCACTG 1910
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