| Tag | Content |
|---|
EnhancerAtlas ID | HS105-38407 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:2549520-2550750 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nr2f6(var.2) | MA0728.1 | chr19:2550442-2550457 | TGAACTCCTGACCTC | - | 6.22 | | Nr5a2 | MA0505.1 | chr19:2550434-2550449 | GCTGGCCTTGAACTC | - | 8.25 | | RARA | MA0729.1 | chr19:2550439-2550457 | CCTTGAACTCCTGACCTC | - | 6.73 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_01424 | chr19:2549502-2550866 | Adrenal_Gland | | SE_02772 | chr19:2549494-2550376 | Astrocytes | | SE_06606 | chr19:2541747-2551599 | Brain_Hippocampus_Middle | | SE_27574 | chr19:2549477-2550891 | Esophagus | | SE_37152 | chr19:2548802-2551562 | HSMMtube | | SE_43218 | chr19:2549304-2551188 | Lung | | SE_44559 | chr19:2549245-2551401 | NHDF-Ad | | SE_45404 | chr19:2549699-2550586 | NHLF | | SE_49293 | chr19:2549472-2551388 | Right_Atrium | | SE_52142 | chr19:2549364-2550805 | Skeletal_Muscle_Myoblast | | SE_53390 | chr19:2549503-2550470 | Spleen | | SE_63981 | chr19:2549444-2550732 | HSMM |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I002549 | chr19 | 2549150 | 2551320 |
|
Enhancer Sequence | TTGTGATCCA CGTGTCTCGG CCTCCCAAAG TGCTGGGATG ACAGACGTGA GCCACCGCAC 60
TGGCCGGGGC TGTGTTTTCA TCTGGAGGTT TGCACGGGGC CGGGGCATTG TAAGGCTAAG 120
CATGGGAATT TCAGTCTCTC CCCCAGAACC TTCTGGAGAG ACACCACTGC AGCTACCACC 180
GCTGCAGCTA CCAGGCACCA GCTGACCAGG AGGGAGGAAA CACAAGGCTG CTGTGTCTGG 240
GGTCAGCCAG CAGGCCGGGG GTGAGGGCGG GGGTGACAGG GGAGCCAGCA CACTTGTTGT 300
GCACAAAGTT CCTTGTGACA GTGAGTTCGT CTTGGCCTCT GTCCCAAGAT GAGGTTTTGA 360
TGACACGCAT GGAATTTCTA ACAATGAAAT GGAGTGTGTG GTTTTGCTCA CGCTTACATC 420
CCCTTTTCTT GTCTATCCAA ATTCCATTAC GCCTTTTCTT GCTAATGCAG AAACACGGCC 480
AAATCCTGGG CTGCCCCAGG AAGTGCCGAG GCCTCTTTCC GCTCTCAGTG GAAAAGGGAA 540
ATGTGGCTGC CTTGGGTCTG GGGTGCCCTG ATTCTCAGAA TCCCTGTGGG ATGGGGAAAG 600
AGTGTTTGGG TTGAGACTGG CTCACAGGAA GTGGGTAGAA TGCAGCAGAA GGAGCGGCTG 660
GGAGGCACTC TCTCATCCAG CCCCCGTGGC GACCCTCCTT GCTGGCTTAT TTTGAGACGG 720
AGTCTTGCTC TGTCGCCGAG GCTGGAGTGC AGTGGCGCAA TCTCGGCTCA CTGCAACCTC 780
CGCCTCCCGG GTTCAAGCGA TTCTCCTGCC TCAGCCTCCT GAGTAGCTGG TAGCTGGGAT 840
TACAGGCATC CAACACCAAG CCCGGCTAAT TTTTTTATTT TTTGGTAGAG TCGCGGTTTC 900
ACCATGTTGT TCAGGCTGGC CTTGAACTCC TGACCTCAAG TGATCTCCGC CCACCTCAGC 960
CTCCCAAAGT GCTGCGATTA CAGGCAGGAG CCACCGCTCC CGGCCACCTC TGCTCACCTC 1020
CTCACCAAGC CCCAGCTTCT GTGACTGTCC CCCAGGGAGA GTGACCATGG CCCTGCTGGG 1080
CTCTGAGGGG CTTGTGCAGA TGAGCAGGTG GCCTACACAG CCTGAGGGAC CACCAGCTGC 1140
TCTGTGGCAA GTCTCGTGAC TCCAATCCCG CTCTGCCTCT GGCCAGCCCC CGGGCCTTGC 1200
CACATCTTTT GGTTGCCGAG CCTCAGTTTC 1230
|
