EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-38399

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:2490950-2492080

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1

MA0050.2

chr19:2491952-2491973

TCTTTCTTTCTTTTTTTTTTT

6.25

dbSUPER

Number of super-enhancer constituents: 12
ID	Coordinate	Tissue/cell

SE_24383	chr19:2490669-2491268	Colon_Crypt_2
SE_24383	chr19:2491287-2491968	Colon_Crypt_2
SE_25170	chr19:2490646-2491955	Colon_Crypt_3
SE_27369	chr19:2490633-2492097	Esophagus
SE_31940	chr19:2490678-2492023	Gastric
SE_37152	chr19:2490278-2499382	HSMMtube
SE_41828	chr19:2490655-2491964	LNCaP
SE_43297	chr19:2490649-2491929	Lung
SE_44558	chr19:2490659-2492087	NHDF-Ad
SE_48020	chr19:2490938-2491828	Pancreas
SE_50943	chr19:2490599-2491991	Sigmoid_Colon
SE_54295	chr19:2490687-2492105	Spleen

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I002490

chr19

2490659

2497696

Enhancer Sequence

GCACGTGCTG ATTTGGGGTG GGAGTAGAGT GCAGGGAACT CATCTGTGTG CAGCCCCTTT 60
CTCTGGGCCC TTTGTGTGCA CCTCAGTTTA CCCCACCTGG GTAAGAGACT CTGCCCTGCT 120
GGAGTCTCTT CTGGTTCTGA CTTTGAAGGG CTCCAAGGTG TGGGGGGAAA GGGGGCTGCA 180
TTCCCTCTCT GCTGTGTGCC TCTGGGTGGT GGATTCAGGC TAGCAGGGCT GGGGGCTGGG 240
CCTCCAGGCC CTTCCCGGAA GCCCGGGAAG CAGGTGCAAG GGTAGGCAGT CTCCACGGGC 300
AGGGCGCCAG ACCTTGGCTT CCCTGAAACT GGGCACAGCA GCTGGGAGAG GTTTCCGGGC 360
CCGCCTGGCC CCACCTGGCC CCTGGCACTT TCGGAAGATG GGCGGGGCAG GCAGGCAATG 420
CCAAGGACGG GCGAGGCCCA GCCTGCACAA GAGTCGCCGG TGAACCTGTG CGCACACACG 480
GGTGTGCATG TATATGTGTG CACACGTGCA TGGGCCATGC TGATGTGAGT TCTGTACCCC 540
ACCTACAAAC GGGTGTGCTC ATGAACACGT GCAGGGTCAC CCTGGCACAT GAACCGTGCA 600
GCACAGGCAA TGGCCCAGCG GTAATTCACC CATAGCGGTG ACAGGAAAGA GATGCTTGTC 660
TGCTTTGCTC ACTGTGCGTC TCCAGCACCC CACAGCTGGT TGGCACTTGG TGAATATTTG 720
CTGAGTGGAC AAATGAGTGA ATACACGAAC ACATCATTTT GCAAATATGT ACTGAATGTC 780
TCTACTCTGC ATACCAGACA TTTGCACATC TTCAAACAAC AAAAAGATCC TGGGAAACGA 840
CATTCTAGAC ATCCACGGGG TGGGAATAAG CCCACGCCTG AGAGTACACA CTCATGTCCA 900
GGAAACACCT GAGTCCACTT TGATTTGTTC ACCTCCAGAA GCCAGAGCCT GGTGCCCACA 960
CACAGGCCCT CATGCAGAGA CACGCATTTT CTTTCTTTTT TTTCTTTCTT TCTTTTTTTT 1020
TTTGAGATGG AGTTTTGCTC AGTTGCCCGG GCTGGAGTGC AGTGGCGCGA TCTCGGCCCA 1080
CTGCAAGCTC CGCCTCCCGG GCTCACGCCA CTCTCCTGCC TCAGCCTCCC 1130