| Tag | Content |
|---|
EnhancerAtlas ID | HS105-38395 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:2476630-2477020 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr19:2476918-2476939 | TTGCAGTTTCTCTTTTGCTCT | + | 6.22 | | ZIC1 | MA0696.1 | chr19:2476735-2476749 | TGCCCCCCGCTGTG | + | 7.17 | | ZIC3 | MA0697.1 | chr19:2476735-2476750 | TGCCCCCCGCTGTGG | + | 6.16 | | ZIC4 | MA0751.1 | chr19:2476735-2476750 | TGCCCCCCGCTGTGG | + | 6.3 |
|
| | Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
| SE_27369 | chr19:2474618-2479866 | Esophagus | | SE_31940 | chr19:2474480-2480239 | Gastric | | SE_37152 | chr19:2474249-2480432 | HSMMtube | | SE_41828 | chr19:2476100-2478155 | LNCaP | | SE_43297 | chr19:2474594-2480102 | Lung | | SE_44558 | chr19:2474745-2479214 | NHDF-Ad | | SE_50943 | chr19:2474576-2479856 | Sigmoid_Colon | | SE_54295 | chr19:2474318-2479610 | Spleen | | SE_58097 | chr19:2476156-2476747 | VACO_9m | | SE_58097 | chr19:2476975-2477162 | VACO_9m | | SE_59168 | chr19:2445773-2480575 | Ly3 | | SE_65706 | chr19:2474518-2480709 | Pancreatic_islets | | SE_67280 | chr19:2474034-2480012 | MM1S |
|
Enhancer Sequence | GAGTCAGACC CCCTTCCCGG GCTGGGCGCG GGTGGGACGG GACCTCCCCT CCGCTCTGGA 60
CGCTTTCCGC ACGCTTGTCT TGCATGGAGC TGGGACTTCC CCAAGTGCCC CCCGCTGTGG 120
ATGCAGAGCT TCTCTGCCGT TTTGTGGATC GGGGGCTGCC GTATCCTGAT GTATCGTCTG 180
CAAACACCCC TCCCGCCGTG GGCCTGTCTC CCCCTACCCC ATACTTTGAA CCGTGTGCCC 240
TCCCCTCCCC CCACCGTCAC CAGCTTGCAG AGGCAATCCC CTGCACCCTT GCAGTTTCTC 300
TTTTGCTCTT GCACGCTCCT TTTTTGCAAA CTCCCCCTGC ACGGTGGCCC CTCCCCTGTC 360
CCCGGCTGAC CCATCCCTAC CCTTTGGCCC 390
|
