EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-38358

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:2050950-2051090

Target genes

Number: 19
Name	Ensembl ID

CTB	ENSG00000261526
FAM108A1	ENSG00000129968
SCAMP4	ENSG00000227500
ADAT3	ENSG00000213638
AC012615.1	ENSG00000198683
CSNK1G2	ENSG00000133275
BTBD2	ENSG00000133243
MKNK2	ENSG00000099875
MOB3A	ENSG00000172081
IZUMO4	ENSG00000099840
AP3D1	ENSG00000065000
DOT1L	ENSG00000104885
PLEKHJ1	ENSG00000104886
SF3A2	ENSG00000104897
AMH	ENSG00000104899
OAZ1	ENSG00000104904
C19orf35	ENSG00000188305
LSM7	ENSG00000130332
TIMM13	ENSG00000099800

dbSUPER

Number of super-enhancer constituents: 49
ID	Coordinate	Tissue/cell

SE_00410	chr19:2040386-2053186	Adipose_Nuclei
SE_00877	chr19:2043921-2052778	Adrenal_Gland
SE_02925	chr19:2048869-2051301	Bladder
SE_04258	chr19:2046741-2052500	Brain_Anterior_Caudate
SE_05392	chr19:2047378-2051239	Brain_Cingulate_Gyrus
SE_06065	chr19:2039897-2052942	Brain_Hippocampus_Middle
SE_07327	chr19:2047327-2052628	Brain_Hippocampus_Middle_150
SE_08493	chr19:2047327-2052448	Brain_Inferior_Temporal_Lobe
SE_10185	chr19:2047987-2054377	CD19_Primary
SE_11386	chr19:2039336-2059166	CD20
SE_14045	chr19:2049408-2053107	CD34_Primary_RO01536
SE_14636	chr19:2046521-2051249	CD4_Memory_Primary_7pool
SE_17004	chr19:2048366-2052914	CD4p_CD225int_CD127p_Tmem
SE_17626	chr19:2038511-2053432	CD4p_CD25-_CD45RAp_Naive
SE_17917	chr19:2046688-2053390	CD4p_CD25-_CD45ROp_Memory
SE_19564	chr19:2046765-2052948	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20037	chr19:2048084-2051202	CD56
SE_20925	chr19:2047955-2052980	CD8_Memory_7pool
SE_23148	chr19:2047060-2052907	Colon_Crypt_1
SE_23772	chr19:2047435-2051308	Colon_Crypt_2
SE_25073	chr19:2047159-2052899	Colon_Crypt_3
SE_26566	chr19:2038851-2054518	Esophagus
SE_28069	chr19:2048918-2051185	Fetal_Intestine
SE_29067	chr19:2049038-2051201	Fetal_Intestine_Large
SE_31409	chr19:2043840-2053094	Gastric
SE_34292	chr19:2046713-2063146	HCT-116
SE_34839	chr19:2048987-2051185	HeLa
SE_39943	chr19:2049362-2052838	K562
SE_40728	chr19:2042250-2052968	Left_Ventricle
SE_41572	chr19:2043959-2052890	LNCaP
SE_42204	chr19:2043982-2052921	Lung
SE_46685	chr19:2048280-2051328	Ovary
SE_47494	chr19:2046951-2051306	Pancreas
SE_48086	chr19:2036911-2052819	Psoas_Muscle
SE_48699	chr19:2046500-2052937	Right_Atrium
SE_49469	chr19:2048799-2051277	Right_Ventricle
SE_50075	chr19:2046933-2053000	Sigmoid_Colon
SE_51187	chr19:2038576-2052883	Skeletal_Muscle
SE_52407	chr19:2048606-2053006	Small_Intestine
SE_53798	chr19:2037650-2053000	Spleen
SE_54890	chr19:2046717-2052159	Stomach_Smooth_Muscle
SE_55272	chr19:2049431-2052904	Thymus
SE_57445	chr19:2048510-2051278	VACO_503
SE_57963	chr19:2050058-2051212	VACO_9m
SE_59032	chr19:2040556-2063003	Ly3
SE_59944	chr19:2041147-2096724	Ly4
SE_60429	chr19:2041140-2096762	DHL6
SE_65305	chr19:2038632-2051258	Pancreatic_islets
SE_68856	chr19:2049853-2051215	H9

Enhancer Sequence

GGGCGGGAGC AGACAAAGGG AGGGCGGTGA GCGGAGCCCG GCCTGCCAGG AGCGCGGACC 60
GGGCGGGGGC GGCGAGGGCT CCGCGGGGCC CGTTTCCCGC TACCGGGTCG GTGTCCTCGG 120
GGCCGCCCTG GGGTTCGCAC 140