| Tag | Content |
|---|
EnhancerAtlas ID | HS105-38342 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:1897410-1898260 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| STAT3 | MA0144.2 | chr19:1897720-1897731 | CTTCTGGGAAA | + | 6.62 | | Stat4 | MA0518.1 | chr19:1897720-1897734 | CTTCTGGGAAAGGG | + | 6.38 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_16076 | chr19:1897369-1898070 | CD4_Naive_Primary_7pool | | SE_16627 | chr19:1897264-1898280 | CD4_Naive_Primary_8pool | | SE_17066 | chr19:1897361-1898081 | CD4p_CD225int_CD127p_Tmem | | SE_18006 | chr19:1897111-1898511 | CD4p_CD25-_CD45ROp_Memory | | SE_20207 | chr19:1895084-1898764 | CD56 | | SE_20804 | chr19:1897129-1898577 | CD8_Memory_7pool | | SE_21628 | chr19:1897187-1898228 | CD8_Naive_7pool | | SE_22168 | chr19:1897343-1898194 | CD8_Naive_8pool | | SE_22514 | chr19:1895087-1898475 | CD8_primiary |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr19 | 1897896 | 1898000 | | chr19 | 1898000 | 1898017 | | chr19 | 1898045 | 1898200 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I001895 | chr19 | 1895000 | 1898669 |
|
Enhancer Sequence | CCCCCCGGAT AGCTGGATTA CAGGCGCCCA CCACCACACC CGGCTAATTT TTTGTATATT 60
TAGTAGAGAC GGGGTTTCAC CGTGTTAGCC AGGGTGGTCT CGATCTCCTG ACCTCGTGAT 120
CCACCTGCCT CGGCCTCCCA AAGTGCTGGG ATTACAGGCG TGAGCCACCG CACCCGGGTG 180
ACACTCCATT TTTGACCCCA GTGTTAGCAC AGAGCTTTTA AACTTCCGCA CTGCTGATGA 240
GGGAGTGTGA TTGTTCTCTG TTACCAGCAC TGTCTCCCGC CCACCGGAGC CGAGTGTGGT 300
GGGTGTGGAC CTTCTGGGAA AGGGTGTAAA CACGTGCTTA GATCCGGCCG GAAGCCCCGT 360
GACCGGGGTG CAGCTGCCTT TGGTCAGTAG GTGGCAACCG TGTCCGCTTG ATTTTGGGAG 420
GGTCCGAGAG GCTGGTGCAG GGCTCCCAGG AGAGGCGGGG GCGATCCCAC TTGCCTTGCC 480
AGGATAACAG CAACAAGGGC TGCCCACGTG CATGCTGGGC AATAGGGATA CCGCAGAGAA 540
TGAAAGTCCA GCCCTAGCAG GGCAGCAAGA CCTCGACTCT ACAAAAATTT CAACCACAAC 600
AAAAATTAGC TGGGCGTGAC GGAACACATC TGTGGTCCCA GCTACATGGG AGGCTGAGGT 660
GGGAGGATCG CTTGAGCCCG GGTGGCAAAG GCCACAGTGA GCTATGACTG CACAACTGCA 720
CTCCAGCCTG GGTGACAGAG GCAGATCTTG TCTCAAAAAA AAAAAAAAAA ACAAAAAACA 780
AAACAAAAAC ACCAAGGCCA GGCACGGTGG CTCATGCCTG TAATCCTAGC ACTTTAGGTG 840
GCTGAGGCGG 850
|
