EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-38322

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:1511800-1512960

Target genes

Number: 30
Name	Ensembl ID

WDR18	ENSG00000065268
MED16	ENSG00000175221
GRIN3B	ENSG00000116032
C19orf6	ENSG00000182087
CNN2	ENSG00000064666
POLR2E	ENSG00000099817
GPX4	ENSG00000167468
SBNO2	ENSG00000064932
STK11	ENSG00000118046
C19orf26	ENSG00000099625
ATP5D	ENSG00000099624
MIDN	ENSG00000167470
CIRBP	ENSG00000099622
C19orf24	ENSG00000228300
MUM1	ENSG00000160953
NDUFS7	ENSG00000115286
AC005329.7	ENSG00000248015
GAMT	ENSG00000130005
DAZAP1	ENSG00000071626
RPS15	ENSG00000115268
APC2	ENSG00000115266
C19orf25	ENSG00000119559
PCSK4	ENSG00000115257
REEP6	ENSG00000115255
ADAMTSL5	ENSG00000185761
PLK5	ENSG00000185988
MEX3D	ENSG00000181588
MBD3	ENSG00000071655
TCF3	ENSG00000071564
SCAMP4	ENSG00000227500

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF4	MA0039.3	chr19:1512054-1512065	CCACACCCTCC	+	6.32
Nr2f6(var.2)	MA0728.1	chr19:1512719-1512734	TGACCTTCTGACCAC	-	6.14
RARA	MA0729.1	chr19:1512716-1512734	GCTTGACCTTCTGACCAC	-	7.05
SP2	MA0516.2	chr19:1511910-1511927	GAGGGGGTGGGACTGAG	-	6.47
ZNF263	MA0528.1	chr19:1511969-1511990	GGAGCAGGGAAGGGGAGGAGG	+	6.87
ZNF263	MA0528.1	chr19:1512083-1512104	GGGGGAAAGAGGGGGGAAGGG	+	6

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_28525

chr19:1507143-1513878

Fetal_Intestine

Enhancer Sequence

CCCAGGGCTC CCTCAGCTCC CAGACAGCAG GGAGTCCCCC GGATTGGGGA TGGGACAGGG 60
AGGGGGTGAC CTGGCCCAGG TCCGTTCGGT GCCTCATGGC CTCATCGGCG GAGGGGGTGG 120
GACTGAGCTC CGGGGCAGCC CGTGGAGGGA AGGGGCCACT GCTGAGGCTG GAGCAGGGAA 180
GGGGAGGAGG CTGACTGCCT CTCTGGGCCT TAGTTTCTCC ATCCTGTCAG GGCAGGGATG 240
AAGTCACTTG CCATCCACAC CCTCCTCATG ACCCCAGCCT GCAGGGGGAA AGAGGGGGGA 300
AGGGAAGCAG CCGCCAAGTG AGCCAGGGCG TCCTGCTGCC AGCAGAGCCT GAAGGCAGGT 360
GGGTGAGCCC CGGCCCGGGC ACCAGCTGGG GAAGAGGCTG GGTCCCACCT GGACCCTGTT 420
TCCCTGGCTC CAGCATTTGG ACTTCTGAGG CACCAAGGGT CTAGGGTCCT GGGTATCTCT 480
AGGTACTGAG ACAGCTGTGT GGTCTGCTGC ATCCGTGCCC CTCTCTGAGC CTAGAGCCTG 540
GGCTGGCCCA GGAAGCAGGA AGAAGTCTGC ACCAGAAACT TAAAACAAGG GGAGGGGGGC 600
CAGGTGCGGT GGCTCACGCC TGTAATCCCA GCACTTTGGG AGGCCAAGAC AGGCGGATCA 660
CCTGAGGTCA GAAGTTTGGG ACCAGCCTGA CCAACATGGT AAAACCCCAT CTGTACTAAA 720
ACACAAAAAT TAGCCCGGTG TGGTGGTGCA CACCTGTAAT CCCAGCTACT TGGGAGGCTA 780
AGGCAGGAGA ATCGCTTGAA CCCAGGAGGC GGAGGTTGCA GTGAGCCGAG ATGGGGCCAA 840
TGCACTCCAG CCTGGGCGAC ATAGTGAGAC TCAGTCTCAA AAACAACCAA CCAACCAAAA 900
AAAACAGGGG GAGGGGGCTT GACCTTCTGA CCACCCCCAC CGGACTCTAA GCCTGGTTTG 960
AGGAGTGGGG GTCTAGGTGG TGAAAAGTGG GGGGCTACAA GGACCACCCT ACCCCCTCCT 1020
CAATGGGCCC TGCCCAGAAT CAAGGCTCTC CCCTCCCCGT GTGGGCTGCA GCCCGGACTG 1080
GCGGAGGGAT CTCAAGGCAA GCCGCACCTC TGGGCCTCAG TTTCCCCCGG AGAAAGTGGG 1140
AGGATAGGCA GATGGACTTA 1160