EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS105-38294 
Organism
Homo sapiens 
Tissue/cell
IMR90 
Coordinate
chr19:1255060-1255420 
Target genes
Number: 42             
NameEnsembl ID
WDR18ENSG00000065268
RNF126ENSG00000070423
FSTL3ENSG00000070404
ARID3AENSG00000116017
R3HDM4ENSG00000198858
MED16ENSG00000175221
PTBP1ENSG00000011304
LPPR3ENSG00000129951
CFDENSG00000197766
ELANEENSG00000197561
AZU1ENSG00000172232
MIER2ENSG00000105556
GRIN3BENSG00000116032
C19orf6ENSG00000182087
CNN2ENSG00000064666
ABCA7ENSG00000064687
HMHA1ENSG00000180448
POLR2EENSG00000099817
GPX4ENSG00000167468
SBNO2ENSG00000064932
STK11ENSG00000118046
C19orf26ENSG00000099625
ATP5DENSG00000099624
MIDNENSG00000167470
CIRBPENSG00000099622
C19orf24ENSG00000228300
MUM1ENSG00000160953
NDUFS7ENSG00000115286
AC005329.7ENSG00000248015
GAMTENSG00000130005
DAZAP1ENSG00000071626
RPS15ENSG00000115268
APC2ENSG00000115266
C19orf25ENSG00000119559
PCSK4ENSG00000115257
REEP6ENSG00000115255
ADAMTSL5ENSG00000185761
PLK5ENSG00000185988
MEX3DENSG00000181588
MBD3ENSG00000071655
TCF3ENSG00000071564
SCAMP4ENSG00000227500
Number of super-enhancer constituents: 45             
IDCoordinateTissue/cell
SE_00962chr19:1247386-1256258Adrenal_Gland
SE_02911chr19:1249875-1255425Bladder
SE_05926chr19:1238036-1277685Brain_Hippocampus_Middle
SE_07198chr19:1247246-1263323Brain_Hippocampus_Middle_150
SE_20059chr19:1247351-1256260CD56
SE_23317chr19:1247359-1256211Colon_Crypt_1
SE_23734chr19:1249767-1255102Colon_Crypt_2
SE_23734chr19:1255112-1256018Colon_Crypt_2
SE_26728chr19:1247136-1256303Esophagus
SE_27643chr19:1243483-1263778Fetal_Intestine
SE_28600chr19:1243712-1263790Fetal_Intestine_Large
SE_31560chr19:1247329-1256270Gastric
SE_34407chr19:1243210-1256317HCT-116
SE_34715chr19:1246990-1256396HeLa
SE_39227chr19:1249731-1256264IMR90
SE_40744chr19:1241167-1256331Left_Ventricle
SE_42428chr19:1247145-1256325Lung
SE_45318chr19:1249825-1256324NHLF
SE_47720chr19:1249770-1255471Pancreas
SE_48115chr19:1237899-1256295Psoas_Muscle
SE_48889chr19:1247155-1256279Right_Atrium
SE_49458chr19:1249784-1255716Right_Ventricle
SE_50288chr19:1247164-1256294Sigmoid_Colon
SE_51299chr19:1240966-1256547Skeletal_Muscle
SE_52612chr19:1247343-1256287Small_Intestine
SE_53303chr19:1247161-1263746Spleen
SE_56078chr19:1247465-1256093u87
SE_56885chr19:1254655-1255160VACO_400
SE_56885chr19:1255286-1256243VACO_400
SE_60617chr19:1244182-1267603DHL6
SE_61389chr19:1244367-1268134HBL1
SE_62099chr19:1244346-1267352Toledo
SE_62310chr19:1244144-1267946Tonsil
SE_65296chr19:1250689-1273795Pancreatic_islets
SE_67658chr19:1247465-1256093u87
SE_68135chr19:1237083-1276886TC32
SE_68136chr19:1237083-1276886TC32
SE_68137chr19:1237083-1276886TC32
SE_68138chr19:1237083-1276886TC32
SE_68139chr19:1237083-1276886TC32
SE_68424chr19:1237412-1276913TC71
SE_68425chr19:1237412-1276913TC71
SE_68426chr19:1237412-1276913TC71
SE_68427chr19:1237412-1276913TC71
SE_68428chr19:1237412-1276913TC71
Enhancer Sequence
GTAGGTGTCA CAGCACATGT GTGAGCTCAC GTGTGTCCCG TGACCCTGTG CATTTGGGGT 60
CTACATCCAC CCACAGGCGA CTCCACATAT TCTGGGCATA CACAGGCTGT GTCCGTCTGC 120
TCACTTCACA TGTCCCCCAG GAATCCCCCA CACACACGCC TGGCCCTGCC CGGGGGGCCG 180
CGGGTCACCA GGCGCCTGCA TACTGGGGAC GTGTCCCGCT CCCGCCCCGT GGTCCCTCGT 240
GCACATCAGC CCACATGTCC ACGCCATTGC CTGAGCTCAT GAGCTCACAC CCGTGGACGC 300
CCGTCCTGGA CATGCGGGAC TGTGCCCGTG CCGGGCACTC ACGGCCACCT CTGCCCGCAG 360