EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-38286

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:1231430-1233420

Target genes

Number: 39
Name	Ensembl ID

WDR18	ENSG00000065268
FSTL3	ENSG00000070404
ARID3A	ENSG00000116017
R3HDM4	ENSG00000198858
MED16	ENSG00000175221
PTBP1	ENSG00000011304
LPPR3	ENSG00000129951
CFD	ENSG00000197766
ELANE	ENSG00000197561
BSG	ENSG00000172270
GRIN3B	ENSG00000116032
C19orf6	ENSG00000182087
CNN2	ENSG00000064666
ABCA7	ENSG00000064687
HMHA1	ENSG00000180448
POLR2E	ENSG00000099817
GPX4	ENSG00000167468
SBNO2	ENSG00000064932
STK11	ENSG00000118046
C19orf26	ENSG00000099625
ATP5D	ENSG00000099624
MIDN	ENSG00000167470
CIRBP	ENSG00000099622
C19orf24	ENSG00000228300
MUM1	ENSG00000160953
NDUFS7	ENSG00000115286
AC005329.7	ENSG00000248015
GAMT	ENSG00000130005
DAZAP1	ENSG00000071626
RPS15	ENSG00000115268
APC2	ENSG00000115266
C19orf25	ENSG00000119559
PCSK4	ENSG00000115257
REEP6	ENSG00000115255
ADAMTSL5	ENSG00000185761
PLK5	ENSG00000185988
MEX3D	ENSG00000181588
MBD3	ENSG00000071655
TCF3	ENSG00000071564

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PLAG1	MA0163.1	chr19:1232208-1232222	CACCCCTGGGCCCC	-	6.27
RREB1	MA0073.1	chr19:1231648-1231668	CCCCCACACACACACAACGC	+	6.59
ZNF740	MA0753.2	chr19:1231558-1231571	GTGCCCCCCCCAC	+	6.57
ZNF740	MA0753.2	chr19:1231597-1231610	GTGCCCCCCCCAC	+	6.57

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I001231

chr19

1231638

1233550

Enhancer Sequence

GTGCCCCCCA CACATACAAC GCCTGGGCCC CCCCCACACA CAGAACGCCT GTGGCCCCCA 60
TACACACACA TAGAACGCCT GTGCCCCCCA CCACAGAACG CCTGTGGCCC CCTCACACAC 120
ACACGCCTGT GCCCCCCCCA CAGAACGCCT GTGCACCCCC CATGCCTGTG CCCCCCCCAC 180
AGAATGCCTG TACCCTCCTA CACACAGAAC ACCTGTGGCC CCCACACACA CACAACGCGT 240
GTGCCCTGTC TCTGTCTCAC ACACACAGGA GTGGGCCCTG GCTTGGGCCA GACCCTGGCT 300
GGCATCTCCC CGGGTCAGGT GGGTGCGGAC AGTGGCTGTG TGTACACCCT GGAGTACAGG 360
TGAGAAAACT GAGGCACGGA GGGAAGAGGT GCTGGGACCA GAGAGCCTGA GCAGGGCAGG 420
GCCAGGAAGC GAGTGAGTGG AAGGGCCTCT GGCACCGATA GTGCCTTGTG GCAGCCCTGG 480
TCAACATGTG GCCACTCATA AGGGCGTGTC CTGGACACCT GGTGGCCTGC ACAGCCTGGC 540
TGAAACTACG GAAGGCATGA GAGAGTCACA TACAGGCTGG TGGGGGCCAA CGAGGAGAGG 600
GAGAGAGGTG CCCTCTCCTG CCAGCTCCAC CCTGGTCTGG AGAGCGCTGG GGGACTGCCC 660
CACCCCTGCC TCGGCCCCCT TCTCCCAACA GCCTCCCCAG CAAAGCTTGA GTGGGCAGGC 720
CCCAGCAAAC AGGTTCTGGG ATGTGCTGCA ACCACATTGG ACTCTAAATG TCTCTAGTCA 780
CCCCTGGGCC CCATTCATTT CAAGATCTGG ATTCTCTCAG CTGGAGCGGG GCAGCCAGAG 840
GAGGCCTTCC CCTCCCTGGC CCCTAGCTAC CTTGGGGGTG GGGGCTGGGA GAACTCACCC 900
CACCCCCGCT GGCTGGAGCC ACAACACAGG GTCTCCCACT GTCTGATGAT GTGTCCTCTG 960
TCATGCTGAC AGCACCTTCT CTCTGCACTT GTCCCCTATC CTGGCCTCAC CTGACGACAG 1020
GACCTGCCAC CCTGTCCACA AGGCAGAGCG GGCCCCAGCC CCTCTGGGCT GCCCTGGCCC 1080
TGCTGAGCTG GCTGAGCAGG GCTGGTGCCT GCTGCCAGTG CTACAGATGG GACACCTCTG 1140
CTCCCCACAC AAACTCCTGC CTCGAGCCCA GATAAGGCAG CCCTGTCTCC AGGATCCTGC 1200
CTGACCCAAG GCCTGCAGAA TTGAAGGGCT ACTGTCAAAC AGTCCAGGGA TCTATGTGCT 1260
ACAGCCCAGA GGGCAAAAGC ACCCCCTGCC CCGGAGCTTC GGTAAGTTTT ACTGGCACAC 1320
AGCCACGTGC ATTCGTCATG CAGCGCCTCT GACTGCTTCC TCGCCTCAAC AGCAGCAGAG 1380
TTGTGGAGAC ACAGCCTCTC TGACCATAAC CCCACGAACA CCACCATCCG GGGCCTGATG 1440
GGAAAAGTCT GCTGACCCCT GGCCCAGTCC AACACTTACT TCGTGTTAGA GGAAGTCAGA 1500
GCCCAGACAG GCAGAGGGCC TCGGCCAAGG TCACACAGCA GCTGATGGTC TGCCAGCGGG 1560
CGAGGGAGGG GCCCCGGGGG AACCCGCCTT CCACTCACAT TCCCAGGGAT GAGAGCCGAG 1620
CATGGCTGGG AGGGGATGCA GGCCACAGGC CCCACCCTCT GCGCTCCACA GTGACCAGGT 1680
GGCCCCCGAC ACCCTCCTTT ACCACCTCAT CCTGGATGCC CCAATGGCCC GAGAGCAGTC 1740
GGGGCGCGCA AAGCCTTCCC GCACAGGTTC CCGGAGCTGG GTGGGTCTGG CTCAGGCCGC 1800
CCGCACACTC AGCCCTCCCA GCCACCTGCA GAACCTCAGG CAGCACGCCC GCTGGCAGAC 1860
TGGGCAGGAC TCAGCCCCAG AGCACCGGCT CCCCACCCAG CCCACAACCT CCTGCTCCTG 1920
GATGTCCAGG GCAGCCCCTG GCAGCCAGCA CCCAGCCCAC AGGGGCCCAC TCTCCACCAG 1980
GTGCTACAGC 1990