| Tag | Content |
|---|
EnhancerAtlas ID | HS105-37628 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr18:55880690-55882000 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RREB1 | MA0073.1 | chr18:55881863-55881883 | TGTGTGTGTGTGTTTTGTTG | - | 6.14 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_27800 | chr18:55878027-55884317 | Fetal_Intestine | | SE_28643 | chr18:55877783-55884394 | Fetal_Intestine_Large | | SE_36102 | chr18:55880005-55882192 | HMEC | | SE_41571 | chr18:55880626-55881613 | LNCaP | | SE_46558 | chr18:55879702-55883977 | Osteoblasts | | SE_56455 | chr18:55879664-55882154 | u87 | | SE_59269 | chr18:55878494-55899926 | Ly3 | | SE_64353 | chr18:55879884-55882106 | NHEK |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr18 | 55880754 | 55881007 | | chr18 | 55881305 | 55881780 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH18I058210 | chr18 | 55878166 | 55884140 |
|
Enhancer Sequence | AGAAAAATGT ATAATATCCA GTTCTAAAAG ACGCATTCCT CCTGTGCCCA TATGTGTAAA 60
TGTGTGAGTG TGGAGAACAA GATGAAAATG CTCATTCTGT ATGTTAAGCA GGGAGTGGGG 120
TGGAGGTTAA TGTGGAATGG TGGGAGAGTG GGGTGGCAGG GATTTCCAAG TCACTCACCA 180
GTGATGAGTG TTAACCACAT CCCCATTTTT TTCCTATGAA GGAAGCTGCA ATGCTGTGGT 240
TTGAGGTTAA ACATGCTGGC TCCTTCTCTT AGGTCTTGAT TTGGTTTTTG TTGTTGTTGT 300
TTTTTTTTTA ATTCTAGTCT GTTCTTGTTT TGCTGTGCTG ATATCCTCTT AGATTTTACG 360
AGCATATTAA TTGTGAGTAT TTAACATTCT TCTTTGGTTT ATTCTGAGAC CCCGTTTGCC 420
TGCCCTTTGG CATCATTGGC AGTTTTTGGT GGTCTACTGG TCTTCCTGTT TGTGCCTCTC 480
GTTTGCCCCT TTTTCACTGG AATGTGCCAG GTTGAAGCAA TATGTAGGGC CCGGTGGGAT 540
GGGCCAGGAG GTGGCCTTTC AGATGTGGCT CCTGCATGGC CCTGCTTGCT CTCTTGAGCT 600
GCCTGCACTT CAGTCTTAGG ACCACATTCC TGCTTTGGCC TACATGAAGT GCAAGGTAGC 660
AGTGGGAAAA GCAGAGAGGA AATGAAGCTT CCTGATAAAT CACCTGATCG CTGCCCCAGG 720
GTTAGTCACT CTAGCCCCCT TGGATCTCTT GACTCCATCT CTTGATTTGT TTCTTTTGAA 780
TTTCTGGCAT CTGGAGAATA CTTGTACAGC AGCAGTCCCC TGGTTTTGTT TTTCTTTCAA 840
CCCAAGCCCA TCCCATATCT GTTCATGTGA TGATACTGTG TCTTATTTTC CCAAGATTCT 900
TATGACTGTG ATATTTAGTC TGAATCAGAG AAAGAGAGAG ATAGAAATGT ACACTCAGAG 960
GGCCACTTGG ATGGAAACTT CTGTTGATCT CTCCAAGCCT TAGTGGGATC ATCTGTAGAG 1020
CAGGGATAAT AACAGCGCCT ATCTGTTACT GTTAGGGTTA CTGCAAAGAT TAAAATAGGT 1080
GGTGCTCTTA AAAGACTTAG AACAGTGCTG TCATATAGTA AGGATTCCAT AAACATTAGC 1140
TGCTCGGTTT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTTTTG TTGTTGTTGT 1200
TGTTTTAAAC GGGATCATGC TGGAAATGAT AGATTGCAAC AGAGCTTTGG GGTTTTTTCT 1260
CTAATTAATA GATCTAGGAT GTTTTCTGAG GTGTGTCATG TTTTTAAAAC 1310
|
