| Tag | Content |
|---|
EnhancerAtlas ID | HS105-36241 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr17:79092240-79093170 |
Target genes | |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RARA(var.2) | MA0730.1 | chr17:79092947-79092964 | GGGTCAGGTGAGGGTCA | + | 6.62 | | RARA(var.2) | MA0730.1 | chr17:79092958-79092975 | GGGTCAGGTGAGGGTCA | + | 6.62 | | RARA(var.2) | MA0730.1 | chr17:79092969-79092986 | GGGTCAGGTGAGGGTCA | + | 6.62 |
|
| | Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
| SE_05984 | chr17:79086880-79115617 | Brain_Hippocampus_Middle | | SE_06930 | chr17:79086802-79110979 | Brain_Hippocampus_Middle_150 | | SE_34261 | chr17:79091240-79095954 | HCT-116 | | SE_65309 | chr17:79091272-79094769 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I081119 | chr17 | 79092262 | 79092408 |
|
Enhancer Sequence | TCCTGGCAAG CAGGACAACA AAGTGAACAC AGGGTTCTGA GACACCAGGG CTGCCTCCCC 60
CGCAACTCCC ACCTGGCCTC CATCCCTGGC CCACATACAG GCCGGGCCCC TTCCCTGCAG 120
CAGATCTGGC TGTGTCTAGG TGAGAGATGG ACCCATTTCC CCCACTCCTG TCACTGGACT 180
CAGGCCAACA ACTCTCAGCA AATGCCTCCG AGTCCTGTTT TACGCATAAG GAAACTGAGG 240
CCTGAACAGG AAGGGGATGG CCAAGGTCAT GCAGTGGCCT CCTGGTGACC TGCCTGCTTG 300
TTCAGCCACA CAGGGGGCAC CCTGCACCAG GGGTGAGGCT GACAGGCCCT TCCCCCAGGG 360
CTGCAGCCAC AGGCCAGGAC AGCTAGGGAA GAGGAAGCTG GCAGGGGGCC TTCTCCGAGG 420
AGGTGGGCAC TTGTCAGGCA CGTGGGCAGA GGCTGTAGGG GTAGGGACAC CTGGCAGAGA 480
TGAGCCCAGC CTGGGGTGGG GCGGATAGTG GAGGGCCATG GCCGGGAGCG GTGGCTCAGG 540
CCCCCAGCAG GGCTCCACCT GGGCACCGTG GGGCCGGGGC ACCGTGGGAC CTGGGTCTGC 600
AGGGACTTCT GGCTGGGAAG GTTCCGGTGA GAGGGCCTGC CGCAGGTCTG CGGGGTAGGG 660
TCAGGCAGAG GAGAGCCGAG TGCAGGGGCC AGGTGAGGGC CAGGTGAGGG TCAGGTGAGG 720
GTCAGGTGAG GGTCAGGTGA GGGTCAGGTG AGGGCCAGGC GAGGGCCAGG CGGGGTCCAG 780
GCTAGGTCTG GGGCCGGGAA GGAGCGGGGC CGGGAAGGAG CGGAGCGGAG CGGAGCCGGG 840
GCTGGCCCGG CCCAGGACCT AGACGGAGGG GCCCCACCCT CGGAGCTCCG TGCCCTGCCT 900
CCCGCGTGCC CTTCTGCCAC AGCCCCGCCC 930
|
