Tag | Content |
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EnhancerAtlas ID | HS105-34788 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr17:49030850-49032980 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr17:49031054-49031075 | AAAAAAAAAAAGAAAGAAAGA | - | 6.25 | Myod1 | MA0499.1 | chr17:49031795-49031808 | TGCAGCTGTTCCT | + | 7.34 | TP53 | MA0106.3 | chr17:49031781-49031799 | GACAAGCCCAGACATGCA | + | 6.37 | TP53 | MA0106.3 | chr17:49031781-49031799 | GACAAGCCCAGACATGCA | - | 6.54 | Zfx | MA0146.2 | chr17:49032768-49032782 | GAGGCCGAGGCGGC | - | 6.02 |
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| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_00952 | chr17:49030867-49035094 | Adrenal_Gland | SE_02991 | chr17:49032474-49033379 | Bladder | SE_04178 | chr17:49031015-49032189 | Brain_Anterior_Caudate | SE_05235 | chr17:49030956-49032312 | Brain_Cingulate_Gyrus | SE_06067 | chr17:49030165-49035186 | Brain_Hippocampus_Middle | SE_23191 | chr17:49031126-49031896 | Colon_Crypt_1 | SE_23784 | chr17:49031665-49031984 | Colon_Crypt_2 | SE_26011 | chr17:49032143-49033783 | Duodenum_Smooth_Muscle | SE_26691 | chr17:49030919-49033447 | Esophagus | SE_29967 | chr17:49030933-49033704 | Fetal_Muscle | SE_37666 | chr17:49025326-49036503 | HSMMtube | SE_47468 | chr17:49031102-49031460 | Pancreas | SE_47468 | chr17:49032629-49033381 | Pancreas | SE_48151 | chr17:49023159-49034340 | Psoas_Muscle | SE_49193 | chr17:49032258-49033530 | Right_Atrium | SE_51156 | chr17:49018220-49035057 | Skeletal_Muscle | SE_54412 | chr17:49030869-49034362 | Spleen | SE_54634 | chr17:49031082-49034752 | Stomach_Smooth_Muscle | SE_57824 | chr17:49030927-49033111 | VACO_503 | SE_59738 | chr17:48979175-49044314 | Ly4 | SE_65373 | chr17:49030870-49033427 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr17 | 49032200 | 49032260 | chr17 | 49031200 | 49032200 | chr17 | 49031092 | 49031200 |
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| Number: 1 | ID | Chromosome | Start | End |
GH17I050953 | chr17 | 49030850 | 49033890 |
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Enhancer Sequence | GGGCAACATG GCGAAACACT GATTCTGCAA AAAATAAAAA AAAAATTAGC TGGGTGTGGT 60 GGTGTGTGCC TGTAGTCCCA GCTGCCCGGA GGGCTGATGT AGGTGGATAG CTCCAGCCTG 120 GGAGGTTGAG GCTGCAGTGA ACTATGATTG TGTCACTGCA CTCCAGCCTG GGCGACAGAG 180 GGGAGACCCT GTCCCAAGAA ACAAAAAAAA AAAAAGAAAG AAAGAAAGAA AGAAAGAAAA 240 AGTGGGCTCT GGAAGGAGCC AGCCACCGTT GCCCTCTGGG CACTCACCAT CTCACCCCTC 300 AGGCTCCAAC AGGGTTCCAC GTGACCAATC CCCGAGGGGA GAGGAGACTG CGGAGAGGAT 360 GGGAGGCAAA GCACCTCCTT CAAGCTCCAG GGAGGCAGGA GGATTTGTTT AGGAGTGGCC 420 CTGTGCAGAG GTAGGGGCAT GGCTGAGAAC ACCTTGGGAG GTGGTGTGAA GCTGAGTCCA 480 GGAGCCGCCA GCCCTCCCTG CCACTCAGCT CAGGGGTCAC TTGGGTAGCT TCAGCCTCAA 540 CAGCCGTGGA GTCAAGTGTC TCCTCTACAA AAATAATTCC CAAATAAGTC ACTGCCTTCA 600 CCCCTGGGAC TGGCTGGTGC ACCCAAATTG GAGTCGCCAC CCAGCCCCCT TGAGCATTGC 660 CTTGCTGGCT GATCCAACAG AGGCAGAATT AGCTGATGAG GCTACCACAG CGGGAGGGAA 720 CTGACCTGAG GCCGCCTGGA GAGATGGGAC CCCGAGGGCC CTTTCTGGCA CTACTCACTT 780 GTTGGGTCTG GGGAATTAAA ACACACTCCC CCTCTCTGGG TCTCAGTTTA ACAGGGAGGA 840 GACCACCACC TTCCAAACCT CAGTGACGGC ATCAGGCTGG GGGTGGTGCT GGGCCTCCTG 900 CGTCTGTGTC TGGAGACGCA GCTGACTCCC TGACAAGCCC AGACATGCAG CTGTTCCTGC 960 AGAGGAAGCA GCAGGAACTG GGGAAGGGCA GAGCGCTGAG GGAGGGGCAA GAGGGATGCA 1020 AGGACACCAC AGTGACCGCG TGCAGCGAAG CGAGTATGAG CAGAGTCCCA ATCTCCAGGT 1080 CCCCTCTCCG CGGAAGCACT TTTGTCTTTA TTGGAAATTT CCTCCCATGT AACATCTGAC 1140 CTCTACCTTC TCTTCTACAG ATGAGCTCTG CTGTGAGTCC CAGCGGGCTG AGACACTGTG 1200 ACTGCCCACC TGTCCCCAGG TGCCCCTTCT ATACAGCCCC ATCCCTTCCC AGGGATGCTC 1260 AGTGGCTGCG GCCACCCTTG CTTTCTGCCA CTCAGCCCTT GCAGGGGCTT CACACCCCAA 1320 GAGGGGCAGT CTGGGCTGGG GCTCCTGGAC TCCCTAAGGC ATTATCCCAT CCCCGCAAGT 1380 TGCCCGGCCG GGCCCTGAAG GAAAGGGGCC CCGGACCCAG ACCCGAAGGC TGCTCACCAG 1440 AGGCTCTGCC CAGGGACTCT CACCTCTCCA GCCACTCCAA CTCCCCTCCG GCTTTCCTGT 1500 CATTTCCTGA TGCCACAAAT CTTCTGACAT CCTCCCTCTT CCCCAGTGAA TTTCTTCCCC 1560 AGGCCCTTCC CTTCCTCAAC CTGCTTCATA CTGGACATTC CCAGCTGGTA GGATCTGCCT 1620 GTGGCTCTGC ACAGGAGGCT GGGCAAGGGT GGAGAAGACT GGGGGAGCTG TCTCCCATGA 1680 CCCCAGCAGA GGCGAGAGAC AGAAGCTGCA TCTGGGACCT GTCGGCTGCA GTTTTGGGCA 1740 TTCATACCCA CCTAAGCATT CTGGAACAGC CCTGAACCTG GGCATCAAAC TCCCCAGGCT 1800 TGAGAATGGT GAACACTACT ATTAGGCGCC CCTTCCTCCA GGCCTATGCC GACTCCCCTG 1860 TGCCCATGGA AGCTGTGTAG TCCATGCTGG CTCTGGCTCA TGTGGGTGTC CGGACAGTGA 1920 GGCCGAGGCG GCAAGGGCCC TTTACTCTGT GCACTCCCAG CTCCCCATCC CAGCCAGGGC 1980 AGCCTTGACC CTCCTGCCCC CTTGCTGTGC CATGTGTCAG TTGGCTGGGA TCATGCTCTT 2040 CCCCCGTCTC CATCAAGAGG ATCCAACAGC ATCTTGCAGC TAACACTGGG GCATGGGAGT 2100 GAGGGAAACA AACATGGTAC CCACTCTTCT 2130
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