Tag | Content |
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EnhancerAtlas ID | HS105-34781 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr17:48981560-48983170 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXH1 | MA0479.1 | chr17:48982978-48982989 | TCCAATCCACA | + | 6.62 | SNAI2 | MA0745.2 | chr17:48982947-48982957 | TGCACCTGTT | - | 6.02 |
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| Number of super-enhancer constituents: 29 | ID | Coordinate | Tissue/cell |
SE_02991 | chr17:48981621-48983308 | Bladder | SE_04178 | chr17:48981233-48983332 | Brain_Anterior_Caudate | SE_05235 | chr17:48980897-48982005 | Brain_Cingulate_Gyrus | SE_06067 | chr17:48981497-48983596 | Brain_Hippocampus_Middle | SE_07466 | chr17:48981344-48983162 | Brain_Hippocampus_Middle_150 | SE_08899 | chr17:48982381-48982593 | Brain_Mid_Frontal_Lobe | SE_12167 | chr17:48980692-48983336 | CD3 | SE_19619 | chr17:48979853-48984374 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_23191 | chr17:48981481-48983372 | Colon_Crypt_1 | SE_23784 | chr17:48981620-48983342 | Colon_Crypt_2 | SE_24830 | chr17:48981426-48983406 | Colon_Crypt_3 | SE_26011 | chr17:48979932-48984292 | Duodenum_Smooth_Muscle | SE_26691 | chr17:48979620-48983743 | Esophagus | SE_27621 | chr17:48979817-48984219 | Fetal_Intestine | SE_28540 | chr17:48979724-48984381 | Fetal_Intestine_Large | SE_29967 | chr17:48979940-48983528 | Fetal_Muscle | SE_31399 | chr17:48980105-48984402 | Gastric | SE_36690 | chr17:48980078-48983446 | HMEC | SE_41117 | chr17:48980937-48983480 | Left_Ventricle | SE_42844 | chr17:48981354-48983454 | Lung | SE_47468 | chr17:48981487-48983527 | Pancreas | SE_49193 | chr17:48981509-48983050 | Right_Atrium | SE_49713 | chr17:48981753-48983169 | Right_Ventricle | SE_50311 | chr17:48981438-48983399 | Sigmoid_Colon | SE_52502 | chr17:48981399-48983501 | Small_Intestine | SE_54412 | chr17:48981548-48983164 | Spleen | SE_54634 | chr17:48978631-48984793 | Stomach_Smooth_Muscle | SE_59738 | chr17:48979175-49044314 | Ly4 | SE_65373 | chr17:48981580-48984477 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr17 | 48982200 | 48982800 | chr17 | 48982000 | 48982200 |
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| Number: 1 | ID | Chromosome | Start | End |
GH17I050902 | chr17 | 48979760 | 48984332 |
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Enhancer Sequence | CAACAATATG AACGAATCTT GAAATCATTA GGCTGAGGGG GAAAAGTCAG AGGTAAGAGT 60 AGAGTAGAAA CTGTATGGTA ACGTATACAA AACATGCAAA TCTGATCTGT CATGACAGAA 120 AGCAGATTGG TGCTTGCCTG GGGCCAGGGA AGGGGCATGA CTGACTCAGA AGGGGCCACA 180 GGGAACCTTT CAGGGTAACG GAAATGTTCT CTACTTTGGT TATTGTGGTA GGTATGCAAA 240 CATACAACAG TGCACCTAAA ATGGGCACAT TTTGTTGTGC GTAAGTTAGA CCTCAACAAA 300 GTTGACTTAA GAAATAATTC CTTCCCGAGA GCCTGGCCTA CGAGGTGCGG GCAAGCAGAG 360 AGGCCTCCCT CAAGGCACTG GCGATACTGC CAAGCTGGAA AAACGGCTCG CTGGCAGCCT 420 GGAAAAGGCC GTTCTCTGGC TCTTGATCCT TAAAAGGCTG GAATTTCTGG CTGAACAAGA 480 AGGCCTGGGC CCAGTCCCCA GGGGGCAGCT TCTCCTCAGC TCTGGGCAGG GTGCCCGGCC 540 ACCCCTCACA CAGGTGCTGG CTTGCTGCCC AAACACAGGA CCAGGGGGCC TGGGCAGGCC 600 CCCACAGCCC TGCTGGGGGA AGAGGAGGAG ACCAGCCCGT AGCCAGCCCA GCCTCAGCCC 660 CAGCAGCCTG TGGCTGGCAG GGCCTCTGCC TACACAGCAA GCTCTCAGAG TGGGGGGATG 720 GGAGCAGCGC CCAGGCACCC ACCCAGCTCC CCCAACCCAG AGTGTCACCG GGGACCTTTA 780 CCCTGAATGG GGATGGTTTT AACAGCCCCT AGAGAGGGTC AGGGCATCTG TGACAGGACA 840 GGGTCTGAGC CCCGGACTTT CACCTCTCAG CCCAGTGCCC TTTTCCCCGC AGCAGCCTAA 900 GCTCCCAGTG ATTCTCTGGG GGAGGGATTT CTGATGGGGC TGGTTCTAAA GAAAAGCTCT 960 CCAGGGCAGG GCCTGTGAAA CCCAAGGACT GACTGCTGCG GGGGCTGGAT AGCCTTTGGG 1020 GACAGAGGAG GGGAGAGGGT GGCAGAACCT AAACAGCTGC GGCCGCTGCT TTGTCCAAGG 1080 GCAACCCAGC CTCCCAGGTG TGGCCATCAC CTCTGCCTCT GACCTGAGTC TCAGACCAGA 1140 GCCAGCTGAG GCCTGGGTGC TCCCTTCAGC CCCTTCTGGT TCTGCAATTC AAGGCCCAGT 1200 TAACCCCCTG TGGGGTCATA GAGAAGCTTG CAGAGGGTGA AGCCTGGGAC CTGATTCTGC 1260 TCACCCTGGA CTCTGGCCCA GCCAGTGCCT TCTGGCAACA GGGACCCTCT GGGGTCCCAG 1320 GAGCCCTGGA ACCTCCTCTG CTCCCTCTGG CTCTGTCTCC TGCCCCACCC CCTTCCCTGT 1380 TGCCACCTGC ACCTGTTTTT CCAGCCTTGC TCAATCTCTC CAATCCACAG GCTGTTTGTT 1440 CCCAGGGGTC GCCTCCCCTT ATCTCCCAGG CAGCTGTTGG CCATGGCCTG AAGGTACAGA 1500 ATTCATTGTT AACTCTTCAG CTTCCCTCAC ACACTCCACC CCCAAAAACC ATAGCAGCAA 1560 AGAGCACCAG GGAGGGCCCA GGTTTGGGGT CTGGGGTCTG GCCCTCCCTG 1610
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