EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-34742

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr17:48556380-48556980

Target genes

Number: 23
Name	Ensembl ID

RP11	ENSG00000246640
ITGA3	ENSG00000005884
PDK2	ENSG00000005882
SAMD14	ENSG00000167100
AC002401.1	ENSG00000236472
PPP1R9B	ENSG00000108819
SGCA	ENSG00000108823
HILS1	ENSG00000188662
COL1A1	ENSG00000108821
TMEM92	ENSG00000167105
XYLT2	ENSG00000015532
MRPL27	ENSG00000108826
EME1	ENSG00000154920
RP1	ENSG00000253102
LRRC59	ENSG00000108829
ACSF2	ENSG00000167107
CHAD	ENSG00000136457
RSAD1	ENSG00000136444
MYCBPAP	ENSG00000136449
EPN3	ENSG00000049283
SPATA20	ENSG00000006282
CACNA1G	ENSG00000006283
LUC7L3	ENSG00000108848

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr17:48556901-48556921	GGTGGGGGTGGGGTTGGGGG	-	6.36
RREB1	MA0073.1	chr17:48556899-48556919	GGGGTGGGGGTGGGGTTGGG	-	6.57
RREB1	MA0073.1	chr17:48556900-48556920	GGGTGGGGGTGGGGTTGGGG	-	7.06

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_23477

chr17:48555283-48558241

Colon_Crypt_1

Enhancer Sequence

GTGAGTAGGG GCGGGGGCGG AGCCCACGGT GTGTGGCCGC AGCCCTGGCC GTGACCGTGG 60
CCGTCCAAAA CCCAGGTGGC GGTTTGTCAC TCTATGAACC CGCCTGCCGT GTTTCCGTGC 120
CCCCGTACGA GGTCTGGGAT GGGACCCTGT GCTTTGGCAG GGAAATGACT TGGTCCAGAA 180
ACCTGAAGTC TCTGCTACTC ACCGGCTCGG TGACTCTGAC CAAATGGTTC AAATTTCATA 240
ACAATTTTCC TCTTAGCAAG ACAAAATTTT CTTAAGAGCA GTGTTCTGAC TCGGTAGCTG 300
GGAAAATGGC TCATAGGAAA ATTGTATGAA AATTATATGA TCCCAGAAAG AGCTTGGGTT 360
GAATTCCTTC CTGACGTCTG CTGGTTGGAA GAGGCAGCGT AACAAAGGAG TGAGCCTCAG 420
TTTTCTCACA TTGAAGTGGA TGTAATAACC CCAGTGCGAC CTGCCTTGGG GAGTTGTGTG 480
GCTTAGATGT CCTAGCTACT GTGGAAAGAC CTCGGGATAG GGGTGGGGGT GGGGTTGGGG 540
GTGTGTGCGA CTGAACCCTG GAAGTGGCCA GGGCAGCTCT CACCGCGCAC GTGCACTCAC 600