EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-34152

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr17:40647740-40649070

Target genes

Number: 22
Name	Ensembl ID

NT5C3L	ENSG00000141698
ACLY	ENSG00000131473
CNP	ENSG00000173786
NKIRAS2	ENSG00000168256
DNAJC7	ENSG00000168259
DHX58	ENSG00000108771
KAT2A	ENSG00000108773
HSPB9	ENSG00000197723
RAB5C	ENSG00000108774
KCNH4	ENSG00000089558
GHDC	ENSG00000167925
STAT5B	ENSG00000173757
STAT5A	ENSG00000126561
STAT3	ENSG00000168610
PTRF	ENSG00000177469
ATP6V0A1	ENSG00000033627
AC067852.1	ENSG00000256929
MLX	ENSG00000108788
TUBG1	ENSG00000131462
TUBG2	ENSG00000037042
PLEKHH3	ENSG00000068137
CNTNAP1	ENSG00000108797

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr17:40648088-40648109	AAAAAAAAAAAGAAAGAAAGA	-	6.25
MEF2A	MA0052.3	chr17:40648342-40648354	TTTATTTTTAGC	-	6.04
MEF2C	MA0497.1	chr17:40648341-40648356	TTTTATTTTTAGCAG	-	6.01

Enhancer Sequence

GGACTTCCTT CCTATATGCT AACCTCAAAT TTTTTAACAC TAACCCTGAA GCAAGAGAAT 60
TAAAATGAAG ATAAATAGTT ATGTGGGCTT TCACTGGGCA TGGTCGCTCA TGCCTGTAAT 120
CCCAGCACTT TGGGAGGCCG AGGAGGTGGG ATCACCTGAG GTCAGCATGG TGAAACCCTA 180
TCTCTACTAA AAATAAAATA TTAGCCGGGC GTGGTGGCGC ATGCCTGTAG TCCCAGCTAC 240
CCGGGAGACT GAGGCAGGAG AATCGCTTGA ACCTGGGAGG CAGAGGTTGC AGTGAGCAAG 300
CTGCACTCCA GCCTGTGTGA CAGAGCAAGA CTCCGTCTCA AAAAAAAAAA AAAAAAAAAG 360
AAAGAAAGAA AGAAACAAAC AAAAATAGTT ATGTGGGTTT TCGTTGACAT ATTTTTGGGA 420
AACCTTGATG TATGTATTCA GAGGACTTCT AAGCCATAAG AGACCCAAGT GCCTTGAGGA 480
GCCACATACT TTTCCCTGCG CTGCTTATTT CTGAGGTGGT TAATAATATC GACTCTGGGA 540
AGATTGATTT TTCAAGACTC CTTCCCATTT CTTAATTTAT TTCTGCTTAC TTAGTTTGGT 600
TTTTTATTTT TAGCAGACAT TTTAGCAAAG CAGAAATATA TTTTTCCTGT GGATTTTAGA 660
CTTGCATTCT TATATTTACG AACTTACAAA AACTTATCCG AGAATTAATT TTTTTTTCAA 720
ATGCTTAGGC AAATTAAGTA TGATCAAGTC TTCTTTATTG TGTGCTGTAA AAATGGAGTG 780
GCGGCAAGAA TGTAATACAG GGCATCTGAC TGCTGAGGAA AAAAAAAAAT AATACAGGCT 840
GGGCGAGGTG GCTCATGCCT GTAATCCCAG CACTTTGGGA CACAGAGTCA GGTGGATCAC 900
TTGAGGTCAG GAGTTCGAGA CCAGCCTGGT CAACATGGTG AAACCCCATC TCTACTAAAA 960
ATACAGAAAT TAGCTGGGCA CGGTGGCATA TGCCTGTAGT CCCAGCTACA GGAGGCTGTG 1020
GAAGAATTGC TTGCGCCCGG GAGGAGGAGG TTGCAGTGAG CCCAGATCGT GCCACTGCAC 1080
TCCAGCCTGG GGGACATAGC AAGACTCCAT CTCAAAAAAA TAGATGGAAT GACAGCACCA 1140
CAGGGCTACA ATCAGCGAAA CATAGACTGT GGGAAAATAT ATAAGATAAA CAACCCAATT 1200
TCTTCAAAAG AAATTTTGTA ATGAATGAAA AAGGAAAGAT GGAAGGAGAA CCTGTAGTTT 1260
AGAGACTCAA GAGATATATC TACAATCATA ATGTATAAGC CAGGCACGGT GGCTCACGCC 1320
TGTAATCCCA 1330