| Tag | Content |
|---|
EnhancerAtlas ID | HS105-34086 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr17:40139930-40140740 |
Target genes | | Number: 34 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EWSR1-FLI1 | MA0149.1 | chr17:40140206-40140224 | CCTGCCCTCCTTTTTTCC | - | 6.03 | | TBX20 | MA0689.1 | chr17:40139953-40139964 | CTTCACACCTT | - | 6.32 | | TBX21 | MA0690.1 | chr17:40139954-40139964 | TTCACACCTT | - | 6.02 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_03345 | chr17:40139867-40140608 | Brain_Angular_Gyrus | | SE_04994 | chr17:40137078-40146143 | Brain_Cingulate_Gyrus | | SE_06054 | chr17:40138603-40140441 | Brain_Hippocampus_Middle | | SE_06879 | chr17:40136927-40146147 | Brain_Hippocampus_Middle_150 | | SE_07997 | chr17:40138407-40145949 | Brain_Inferior_Temporal_Lobe | | SE_09953 | chr17:40138933-40140450 | CD14 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I041986 | chr17 | 40138604 | 40140608 |
|
Enhancer Sequence | TCAGGAGAGA GAGAGCAATC ATACTTCACA CCTTTGGTGA CTGAGGGAGC CCAGAAGCTG 60
TGAGCATGGC TTCAAAACTC TAAGAGGATC AGTCATGCTG GCCCCTTAAA TGTCATATTA 120
AGTTCTAGTT CTTTGTCACC AGGGCTATGG ACAGCAACTT CAAAATTGAT TTCTCTTGTA 180
TATGATACAA GCCAGGCACA TCTGTCTTCA AGGATAAACT ACCTTTACCA TTCCATGTTA 240
GTGCCCAATG AAAACATGAA AATAGTAAGG CTGGTTCCTG CCCTCCTTTT TTCCAGAGGT 300
CACCTGCAGG GATCAGAAAT CACTCTGATT TTTAACTGCT AGAATTCTGC AAGGGCAAGG 360
AGTCTACTTT TTGTTTCTGA TGTTGGGTAG GGCCACAAAA GCACTCAGGC CATTTTCAAC 420
CATGCATGGT GACCATCAAT TACACTGGAG AAAAACAAGC TTGCCTCATA CTCTTCCTCC 480
AAATCACTCC TAAAAAATAA ATGATCACTT GCATAAGCAA AACAACAAAA AAGCAACAGT 540
AGGTGCTTAA GATTATCCCA CAGACCCTAG CCATTCTCTT ACTGGAGGAA AGGGACCTTA 600
ATGAACAGGT GAGAATATCC TTGCAAATTG TCCAACTGCC CTCAAATTCC ATAGAGATGA 660
CAAAAGCTTG CCTCTTGGAA GGGAGTTCCT AACAAACTAT TAACCATAAC AACTTTCCCT 720
CTTTCATCTT GCTTACCCTC ACTAGGCAGA TTTCCCAAGA CCCTTTGATG TCCCTTAAAA 780
ATATTTCTAT AGGCCCCAAG ATCTAGATCA 810
|
