EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-34083

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr17:40118910-40120080

Target genes

Number: 25
Name	Ensembl ID

KRT19	ENSG00000171345
EIF1	ENSG00000173812
HAP1	ENSG00000173805
JUP	ENSG00000173801
LEPREL4	ENSG00000141696
FKBP10	ENSG00000141756
KLHL10	ENSG00000161594
NT5C3L	ENSG00000141698
RP11	ENSG00000259623
KLHL11	ENSG00000178502
ACLY	ENSG00000131473
AC091172.1	ENSG00000204815
CNP	ENSG00000173786
NKIRAS2	ENSG00000168256
DNAJC7	ENSG00000168259
DHX58	ENSG00000108771
KAT2A	ENSG00000108773
HSPB9	ENSG00000197723
RAB5C	ENSG00000108774
KCNH4	ENSG00000089558
STAT5B	ENSG00000173757
STAT3	ENSG00000168610
PTRF	ENSG00000177469
TUBG1	ENSG00000131462
CNTNAP1	ENSG00000108797

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GCM1	MA0646.1	chr17:40119601-40119612	GTACCCGCATG	-	6.62
Rhox11	MA0629.1	chr17:40119087-40119104	AGGCCGCTGTAAAGGGA	+	7.89

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_03345	chr17:40118887-40119663	Brain_Angular_Gyrus
SE_03345	chr17:40119834-40121617	Brain_Angular_Gyrus
SE_04994	chr17:40117025-40130757	Brain_Cingulate_Gyrus
SE_06054	chr17:40116617-40130711	Brain_Hippocampus_Middle
SE_06879	chr17:40117505-40130709	Brain_Hippocampus_Middle_150
SE_07997	chr17:40117011-40130656	Brain_Inferior_Temporal_Lobe
SE_47911	chr17:40118777-40120434	Pancreas

Enhancer Sequence

AGGCCGGGCG GGGCCGGGCA CGGGGTAGCA CCAGGGCGGG AAACGAGTGT CGGGGCCCCT 60
CGGGAGGAAG CGTCTTGCAA ACGAGGACCC GGGGCTCCGG GTTCGACTTC CAGTTTTCTT 120
GGTACTCAGG GCGGCCCTGA GGTCTGGGAG AAGCGGAGGG GTTTTGGGGT GCCGGAGAGG 180
CCGCTGTAAA GGGAAACGGT GGTGTTTCTC AGGAGGGAAC TCGGGACCGC AGAAGCTGCT 240
GCGCCTCTGG GAGCCTGGGT GGGCCTGGGC CGGGAGCCCG GGAGCTGCTC CCGACCCCAC 300
GCAGGCCCGC GCTGGGGCAG CCGCTTCGGC GCCCCCTCCC CGGGCCCAGT CTCATCACGC 360
GGAACCGCTG CCCCGCGCCC GGGTGCGGGC GGGAGGTGGA GCCAGTTCAG AGGAGGGGAC 420
CCTTTACGGT AAAAGCTGCC GTCCCTTGTG GCTTCTAGAA GATAGGAAAA CAAGTGGCTC 480
CGAGAGGCGC TTCTGACACA CAGCACAGCG GCGGGTAGAG CTGGATCCTA ATTGCAGGTG 540
CCCTGTGCTG CCCTGTTCTG GACAGGCACA AAGACCACGA CTTTGTGGGG GCCGGGAGAG 600
GGTAGAGGAG GAGGTGGCAG GCTTGGTGAA AGAGGGCCTT TGTCCAGTGC TCTCCTGCCC 660
TGCCCCCCAC CAGCCCTTCT GTGGGACCAT TGTACCCGCA TGCCAGACAA GAGAGTATTA 720
TCTGTTGCGG CCATTGTTGG GGGAAGGGAG GCAGTCTTGG GGTAACCCTT CTCCACTCCC 780
CCCCTTCTCT GTGCACTCAG CCGTGGCAGC TGTGGCTTGG CCCAGACACA GAGACCCCCA 840
CCTCCAAAGA GGACGTCCTT AGTAGGTGCC AAGCATATAA GAGTGAGGCC AGTCCCAGAA 900
CCGCAGGCTC CTGGCGCGCC CCGCATGCCT CCAGCACGTT TACCTTTCCG AAGTGGCAGG 960
AATGGGGAAA GCGCACGCTT AGGAGAGCTT CAGACAAGCT TCCCTCTTCC TCCTCCACGA 1020
CCAGAAGCGG AAAGGTGCTC CCGGACCGAA AGGGAAAGAA GGTCCAGCAC TGCCCCGCTT 1080
GGGAAGGCAC CCACAACCAG TCTAGGGACT AGGGGTAAGG CCGGCGGGGA GCCCGCGAAT 1140
GACCTGGGCT GACATCTCTT CCCCTCCTTA 1170