| Tag | Content |
|---|
EnhancerAtlas ID | HS105-34062 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr17:39956860-39958200 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr17:39958002-39958021 | TCCCGCCCCCTGGTGGCAG | - | 7.48 | | Foxa2 | MA0047.2 | chr17:39957853-39957865 | ACAAAGTAAACA | - | 6.18 | | KLF5 | MA0599.1 | chr17:39957111-39957121 | GGGGCGGGGC | - | 6.02 | | PLAG1 | MA0163.1 | chr17:39957529-39957543 | CCCCCTTTGCCCCC | - | 7.08 |
|
| | Number of super-enhancer constituents: 16 | ID | Coordinate | Tissue/cell |
| SE_23177 | chr17:39956502-39958045 | Colon_Crypt_1 | | SE_23845 | chr17:39956729-39957859 | Colon_Crypt_2 | | SE_24826 | chr17:39956827-39958000 | Colon_Crypt_3 | | SE_26576 | chr17:39954386-39958196 | Esophagus | | SE_27684 | chr17:39956419-39958391 | Fetal_Intestine | | SE_28604 | chr17:39955674-39958500 | Fetal_Intestine_Large | | SE_31640 | chr17:39956832-39958057 | Gastric | | SE_35990 | chr17:39955060-39958415 | HMEC | | SE_42558 | chr17:39956871-39958008 | Lung | | SE_50269 | chr17:39956747-39958247 | Sigmoid_Colon | | SE_52578 | chr17:39956556-39958197 | Small_Intestine | | SE_56909 | chr17:39956774-39958493 | VACO_400 | | SE_57643 | chr17:39957047-39957920 | VACO_503 | | SE_58007 | chr17:39956803-39957082 | VACO_9m | | SE_58007 | chr17:39957161-39957981 | VACO_9m | | SE_64699 | chr17:39955625-39958048 | NHEK |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr17 | 39956975 | 39957353 | | chr17 | 39956892 | 39957997 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I041798 | chr17 | 39955016 | 39958490 |
|
Enhancer Sequence | CATGCATGCA CGCAGGCAGG CACACATTCA CACCCAGACC CGCACATTCA CGCAACACAC 60
AAGCACACGG GCACTTTCAG ACCCACACCC AGCCGTCCAG ATTCCAAAGC TTGTGCTCAT 120
GGCAGGTTCA CGTCTGCGCA GACACGCCAC AGCACATCCC GCTCCCCACC CTCTGAAGGG 180
CCAGCCCCTC CCAGAAACAG GGGCTGGGCC TTGGTGGACC TGACAACACT GCAGCTTGAA 240
AGAGGTGGGG TGGGGCGGGG CCACCCTGCA CCTGGAGGCG GTCAGGAAAC GCTACCACTG 300
CAGATGTGCT TCCCCGGAAG ACCCACCTAT GGGAGGAAGG AGTGAGGTCA CTGAGCCCCC 360
AGCCTTGACC CAGCCCTTTT TCCAGACTCA GACTCTGCCC TTTCAGCTCT CATCCCGATC 420
AAAGGCCTAG GGGAGGGGCT TGGAGTGGGA CAGGGAGTCC TCCTAGGAAC AGAGGTGGAC 480
AGGGCCCAGG CCAGATCACC TGGCACATCT GGAGAGAAAG TAGGGGTGGG GCAGTGAGAA 540
CTTGGCTTCC CAGCCTTGAC TCTACCTTCA AGTGGGAAGA CAACTCTGCC GCCCTGCCCC 600
CGGGAGGCTG GAAATATGGG GCAGAACTGT CACCTGGCTG GCCTTGGCCC TGGGTTCCTC 660
CCAGACAGAC CCCCTTTGCC CCCACCTCCC TGCTGTGGAA TAGGGGTGGG GTTTGGCGGT 720
GAGTCCCAGG CTAGGAGGTA GCCACCAGGC ACCATCGTTG CCTGCACACC CTGCACACCG 780
GGACCCACTG CCCCTGGGAG CCCATGTAAA ATCGGTCAAG AGGGATCTGG CTGTCCCACT 840
GCACCCCAAG AATCCCAAAG TAATCAAACC ACATCCCTGG GGCTCCTCTG CCTGCTAAGC 900
TGGGGCCCCA ACCCGGCTCT GGAATGTGGG AATAGAGGGC AGCGGCAGGG CCAGCTCCCT 960
CTGACTCTAA GGAAACTGGG TCAGTAAATG CCCACAAAGT AAACACTAGG AGCAAATGTC 1020
CTTGGCCCCC TCCCACACTT GCCACATTCC CCGAGGGAAG TGATCCTGAA CTAGGAAAAT 1080
ACAGGACTTC CCATCTTAGA AATCTGAAAC CATCGTCTTC CCGCCTGGGG AGGACTGTGT 1140
TCTCCCGCCC CCTGGTGGCA GATCTGCACA CTGCGTCCTC TCTCACACAT CCTTCAGCCC 1200
CAGGTGCAGA GGACCAGCCA GGGCCCAGAT GGTGCCCCTC CGCCCCACAT TTTACAGATG 1260
AGGGGACACA GGTGCGGAGA GAGGGAGGGA AGGACCTGTA CCCTTACAAC TGAGCTCCAG 1320
GGAGACGACC ACGGGTACTA 1340
|
