Tag | Content |
---|
EnhancerAtlas ID | HS105-33385 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr17:19233200-19235160 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NFAT5 | MA0606.1 | chr17:19234815-19234825 | AATGGAAAAT | - | 6.02 | NFATC1 | MA0624.1 | chr17:19234815-19234825 | AATGGAAAAT | - | 6.02 | NFATC3 | MA0625.1 | chr17:19234815-19234825 | AATGGAAAAT | - | 6.02 | ZNF263 | MA0528.1 | chr17:19233684-19233705 | TCTTCTTTTTCTCCCTTCTCT | - | 6.1 |
|
| Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
SE_04799 | chr17:19234112-19236605 | Brain_Cingulate_Gyrus | SE_05794 | chr17:19231987-19234467 | Brain_Hippocampus_Middle | SE_05794 | chr17:19234516-19238258 | Brain_Hippocampus_Middle | SE_07739 | chr17:19231808-19234117 | Brain_Inferior_Temporal_Lobe |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH17I019329 | chr17 | 19233312 | 19236361 |
|
Enhancer Sequence | CAGCCCCGGC CTCCTCAGCT CAGAGTGGGC CTCACCTCTG GCCTGATCCA GCATTTCCAT 60 TCACCCTCCT CCTGCCAATT TCCACTCCTC AGAGGGCCTC CTTTTCCCAG ACAACCACCT 120 TTGGGCATCA GTGGGGCCAG CCTCTGCCCT GTGTTGTCAC CTCCCAGGTG ACCGCTCCAG 180 CCCAGCAGAC CCACAGTCCA GTCTCCAGAC CTGTTTTCCT TCCCTGTGTG CCTCTGGGAT 240 GGAAGGATAT CAGGTGGATG CAGTGGGCCA AGTGGCCAGT GGGCCAAGGT GGGCCTGGAG 300 GGGTGGAGGG AGAAGGCCTG GGATGCATTC TTCACACACC CTGTTTGGAC TGGGGTGTGA 360 CAGCCTCTGT CCATCTCTGG GCCACATCTC CCAGCCACAC ATGGCAACTT CTCTCTTTTT 420 TTCTTTCCTG TCTTGGCTTC TGCTGCTTGC CTCCCCCAAT TTCCCTACCA CCTCTATCCC 480 AGTCTCTTCT TTTTCTCCCT TCTCTTTTAT CCCTCCCTAC CAACTGTAGC CACAAGCCTG 540 GCTAGGCCCT GGTGTGAGGT ACAAGCAGCC TGGCACCGTT GACCCTGCTC GACCCCCTTG 600 ACCTCCTCTA ACCCCTCTCA GTTCAAGAGC TCCCAGCTGA GAGACCAGAG GCAGCTTTGA 660 GAATGTGCTG CTTTTTTGGG TCTTTCCTTT GCTGCATTAA TAAGATTCCA TGTGTCTTCT 720 CTGTAGGCCA AAGTATAGCC TAACCTGTCC TTGACTCCTG CTCCGTGCCT CAGTGAGAAG 780 GCAGCGTGGC CATTGTTACA TGTCAGCTTT TGAAACATTT ATCCCCTGCC GGTGCAGTGG 840 CTCACACCTG CAATCCCAGC ACTTTGAGAG GGCCAGCGTG GGAGGATTGC TTAAGCCCAG 900 GAGTTTCAGA CCAGCCTAGG CAACATAGTG AGACCCCCGT CTCTACAAAA AAATTAAAAA 960 ATTAGCCAGA TGTGGTCGTG TGCACCTGCC TGTGGTCCCA GCTAGTCAAG AGGCTAAGGC 1020 GGGAGGATCC CTTGAGCCCA GGAGATTGAG ACTGCAGTGA GCCTTGATCG ATCGCCCAGG 1080 CTGGAGTGCA CTGGTGTTAT TGGTGTTTTG TTTTTTTGTT TTGTTTTGTT TTGAGTCTTT 1140 TTTGCTCAGC TCATATTGTC AGATAGAGTT GTCCTGCCCC TTGCCTCAAC TTTTGTGGAT 1200 TAACAGATTG AAAACATCTT CTCATGACTT TAAAACTTGT TAAAAAATAC TTTGTTGCTA 1260 TATAATCTCT CTTTATATGG CTCAGCAACA ATTCAATAAT TTGGGGGAGG ACATTTTAGG 1320 TTGATTTCAG GTTTTGCTAC TGTAAATGAT GCTGTTGTGA AACTCTTTGT GCTTATAACC 1380 TTGTTCACAT TTTACATTAT TTGCTTAGAC CAGATTCCTA GAAATGGGGT TACTAAGTGA 1440 GAGAATGACT GTTGTTAAGA ATTCCTGTAC CGTGAAGCAT CCCGTCGTGG CAATCACATT 1500 CCTACCGGCC TGGCTCAGCA CAGCCTGTGT TGCCTCTATG GGCTGAATTT TAAAAGACAC 1560 AATTTGCTTT CTTTTTACTA TCAAGAAGTT CATGTTTATT GTGGAAAATT TAGTAAATGG 1620 AAAATGTAAG AAAAAAAAAA AAAAGTAAAT TGCCCATGCC TAGCTTCCAA CCCAAAATGA 1680 CATCTTGGTA TTCTGGAGGA ATGAGCTATA CACACTCTTT TATAACCTGC TTTAGTATTT 1740 TGATAAAGCT TTCTTTGCTT ATCATTAGGT ATTCTTCTGT TCCTGCATGC TGGTGTTTCG 1800 TTATGTGGAC ACTTGATTTA TCTAACCCAG CCCATGACTG GCTGTGTGTC GTCACGTGGC 1860 GCTGTCAGGC AGGCATGTCC CCAGGAGGCC ATGTTTTGTG TTAAGTACAC AGTCTTAGGC 1920 TCTCCCTGCC ACACTCACCC TGCCATATGT GTCCTTGTCT 1960
|