| Tag | Content |
|---|
EnhancerAtlas ID | HS105-33342 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr17:18138850-18139760 |
Target genes | | Number: 14 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| SNAI2 | MA0745.2 | chr17:18139736-18139746 | AACAGGTGCA | + | 6.02 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_01194 | chr17:18137336-18140459 | Adrenal_Gland | | SE_04584 | chr17:18138631-18139776 | Brain_Anterior_Caudate | | SE_05258 | chr17:18129162-18142116 | Brain_Cingulate_Gyrus | | SE_06087 | chr17:18129154-18141539 | Brain_Hippocampus_Middle | | SE_07516 | chr17:18128857-18141501 | Brain_Hippocampus_Middle_150 | | SE_08381 | chr17:18138319-18139799 | Brain_Inferior_Temporal_Lobe |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I018234 | chr17 | 18138278 | 18139899 |
|
Enhancer Sequence | GGTAGGTGTG CGTGCTTATG TGGGTGAGTG GGCCCCTTGC TGTTGGGGGA GAGCCCATCC 60
TGGGCCTGGT GGGTGCAGAG GTGCCAGGAG ACTCAGGCCT GGCCCCTGGT GGGACCAGGT 120
AGTTCCTCCT TGCCCAAGGT GGTTTGGAAT GAAACCTCCC TGGACCTTGG TTCAAGGTGC 180
TGCCCTGATC TGCCTTTTGG CCTGGAACTG AGCTCTACCA AACCCCAGGG CTCCACCCGC 240
CCAGCCTGCC TGCCCTGGGA CTGGAAAATC TGGGCTGGCC CACGCTGAGC TGCCCAGGGA 300
AGGTGCCAGA GAGCCCAGCG TGGGCCTGGC GGGCGCTGAC GTGCCCAGTG ACTCAGGTCT 360
CAACTTCCTG CCCTGCCCCC ACTCCCGCCT GTGCTGGGAC CCTCAGGCCT CTGACTCTGG 420
TGTGCCCTTC CCTGCTGAAG AGCTTGCCGT GGCTTTCAGG GCTGCTGGAA TGAGTCTCAA 480
CCACCCCCAC AGTCACACAC CTCTCACGCC CTGGCTCTGG GCTTTCACCA CCGCCTGGGG 540
CCCTGCTTGG ACTCTGCAGC TGTGTCCCAA GGCTGCGCCC TAGATTTGTC TACTCCTTCC 600
CCTGCCCCCT CCCTGCTTTC TCCCGGCCTC TGTAGTCTTC CTGCTCCTCC ACCTACGTGG 660
CTGCCTTGGG CCCCATGCAG CTCCTCCCCC GGGATGCCCC ATGCTCTGTT CTGTGACTGC 720
CTTACTCTTG ATCACCTCTG ATGGCTGCTC CAGTGCAGGC AGAACCCCCA AAGTCCTCTG 780
TTCTCTACAT GTCCCCCTTT GCCACCTCCT GTTAATCAGG GTGGTCATTT CCACCTTGTT 840
TGGTTTAAAG GCTCCAGGTG CATATGGTGC ATGTGGCCTG GCCTATAACA GGTGCACAGT 900
GTACCTGTGC 910
|
