EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS105-32848 
Organism
Homo sapiens 
Tissue/cell
IMR90 
Coordinate
chr17:7737060-7738230 
Target genes
Number: 54             
NameEnsembl ID
ACADVLENSG00000072778
GABARAPENSG00000170296
CTDNEP1ENSG00000175826
EIF5AENSG00000132507
GPS2ENSG00000132522
C17orf61ENSG00000262481
PLSCR3ENSG00000187838
NLGN2ENSG00000169992
RP11ENSG00000262880
TMEM102ENSG00000181284
FGF11ENSG00000161958
CHRNB1ENSG00000170175
SLC35G6ENSG00000259224
ZBTB4ENSG00000174282
POLR2AENSG00000181222
TNFSF12ENSG00000239697
TNFSF13ENSG00000161955
SENP3ENSG00000161956
EIF4A1ENSG00000161960
SNORA48ENSG00000209582
SNORD10ENSG00000238917
SNORA67ENSG00000207152
CD68ENSG00000129226
MPDU1ENSG00000129255
AC113189.5ENSG00000233223
SOX15ENSG00000129194
SHBGENSG00000129214
FXR2ENSG00000129245
SAT2ENSG00000141504
WRAP53ENSG00000141499
KDM6BENSG00000132510
TMEM88ENSG00000167874
CYB5D1ENSG00000182224
CHD3ENSG00000170004
LSMD1ENSG00000183011
AC025335.1ENSG00000179859
KCNAB3ENSG00000170049
CNTROBENSG00000170037
TRAPPC1ENSG00000170043
GUCY2DENSG00000132518
ALOX15BENSG00000179593
ALOXE3ENSG00000179148
HES7ENSG00000179111
PER1ENSG00000179094
VAMP2ENSG00000220205
SNORD118ENSG00000200463
TMEM107ENSG00000179029
C17orf59ENSG00000196544
AURKBENSG00000178999
LINC00324ENSG00000178977
CTC1ENSG00000178971
PFASENSG00000178921
RPL26ENSG00000161970
NDEL1ENSG00000166579
SNPs
Number: 1             
IDChromosomePositionGenome Version
rs12945870chr177737331hg19
TF binding sites/motifs
Number: 10             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
CTCFMA0139.1chr17:7737494-7737513GGACCACAAGGGGGCGGGG+6.03
KLF16MA0741.1chr17:7737503-7737514GGGGGCGGGGC-6.02
KLF5MA0599.1chr17:7737278-7737288GGGGCGGGGC-6.02
KLF5MA0599.1chr17:7737504-7737514GGGGCGGGGC-6.02
KLF5MA0599.1chr17:7737952-7737962GGGGCGGGGC-6.02
KLF5MA0599.1chr17:7737957-7737967GGGGCGGGGC-6.02
SP2MA0516.2chr17:7737275-7737292GGTGGGGCGGGGCTTAC-6.32
SP2MA0516.2chr17:7737501-7737518AAGGGGGCGGGGCTGGG-7.39
SP4MA0685.1chr17:7737500-7737517CAAGGGGGCGGGGCTGG-6.34
ZNF263MA0528.1chr17:7737843-7737864GAAGGAGGAAGAACTGGGAGG+6.84
Number of super-enhancer constituents: 58             
IDCoordinateTissue/cell
SE_00362chr17:7736603-7749691Adipose_Nuclei
SE_00794chr17:7737655-7737805Adipose_Tissue
SE_01460chr17:7736776-7741022Adrenal_Gland
SE_03060chr17:7736820-7739043Bladder
SE_07374chr17:7736628-7741282Brain_Hippocampus_Middle_150
SE_09335chr17:7736738-7749508CD14
SE_10219chr17:7736912-7740995CD19_Primary
SE_10963chr17:7736505-7749576CD20
SE_11839chr17:7737157-7741286CD3
SE_13009chr17:7737305-7740610CD34_Primary_RO01480
SE_13663chr17:7736905-7743075CD34_Primary_RO01536
SE_14637chr17:7736751-7741594CD4_Memory_Primary_7pool
SE_15503chr17:7736747-7740205CD4_Memory_Primary_8pool
SE_15877chr17:7736989-7740966CD4_Naive_Primary_7pool
SE_16373chr17:7736717-7740994CD4_Naive_Primary_8pool
SE_16857chr17:7736761-7741414CD4p_CD225int_CD127p_Tmem
SE_17316chr17:7736438-7749657CD4p_CD25-_CD45RAp_Naive
SE_18181chr17:7736500-7741530CD4p_CD25-_CD45ROp_Memory
SE_18458chr17:7736822-7741572CD4p_CD25-_Il17-_PMAstim_Th
SE_19122chr17:7736973-7741569CD4p_CD25-_Il17p_PMAstim_Th17
SE_20002chr17:7736896-7741138CD56
SE_20814chr17:7736793-7741548CD8_Memory_7pool
SE_21478chr17:7736783-7741330CD8_Naive_7pool
SE_21983chr17:7736758-7741606CD8_Naive_8pool
SE_22317chr17:7736892-7741613CD8_primiary
SE_23252chr17:7736938-7743520Colon_Crypt_1
SE_23786chr17:7736983-7740967Colon_Crypt_2
SE_24752chr17:7736747-7740961Colon_Crypt_3
SE_26222chr17:7737110-7741572Duodenum_Smooth_Muscle
SE_27333chr17:7736464-7743985Esophagus
SE_27735chr17:7736795-7748982Fetal_Intestine
SE_28723chr17:7736914-7748979Fetal_Intestine_Large
SE_30472chr17:7737213-7743268Fetal_Muscle
SE_31101chr17:7736965-7748958Fetal_Thymus
SE_31884chr17:7736582-7743521Gastric
SE_34849chr17:7736856-7741254HeLa
SE_36418chr17:7736868-7741124HMEC
SE_37513chr17:7737088-7749269HSMMtube
SE_43202chr17:7736302-7741615Lung
SE_44849chr17:7737171-7741111NHLF
SE_46936chr17:7736831-7740869Ovary
SE_47505chr17:7737430-7741032Pancreas
SE_48171chr17:7736384-7749469Psoas_Muscle
SE_49429chr17:7736377-7741297Right_Atrium
SE_49512chr17:7736682-7740299Right_Ventricle
SE_50142chr17:7736446-7749129Sigmoid_Colon
SE_52429chr17:7736451-7749087Small_Intestine
SE_53324chr17:7736407-7749153Spleen
SE_55232chr17:7737423-7741649Thymus
SE_57062chr17:7736640-7740169VACO_400
SE_58092chr17:7737253-7737497VACO_9m
SE_58092chr17:7737557-7740171VACO_9m
SE_59391chr17:7736564-7749016Ly3
SE_60159chr17:7736655-7755976Ly4
SE_60643chr17:7736515-7755898DHL6
SE_62599chr17:7736343-7755812Tonsil
SE_64651chr17:7737491-7741612NHEK
SE_65851chr17:7736129-7741037Pancreatic_islets
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr1777374977738227
Enhancer Sequence
GCCTTAAGTC TCTCAATGCA ATGGTGAGGG TCTGGGGAGG GAGGAAGCCC AGGCCTCACG 60
GAGGACAGAG CTACTGCGGA GCTGCTACTG GACGGGGAAA GAAGCGAGGG AGGTGGGGCG 120
GCCTGGAGCG GAACGGAGGC GTGGCCCTGA ACGAATGGGC AGGGCGGAGC CGCCTGAAGA 180
GGCTGTGGCT TAAGTCTCCG GGCAGGACTT CAGTGGGTGG GGCGGGGCTT ACCTTAGAAG 240
GGCGCGTGAT CCAAATGAGT AGGGATTTGT CAGGCAGGGA TCAGGGCTGA ACCCCGTACA 300
CTGCACCCTG AGGCCCGCAC CCTGAAGCCC GCACCCCGCA CCCGGCATCC TAGCCGGCAC 360
CCGCCCTGAG GCGAGCGGGA CCGGCAGAAG ACGGGGCGGA GCCGGAGAGG GGGACTAGAG 420
CGCGAGGAGG GGCGGGACCA CAAGGGGGCG GGGCTGGGGA GCGGGGGTGC GGGTGTTTGT 480
GTTGGAAAAT CCAACTGCGC CACTGGGCGG AGCGGCCCCC CCAGCCCCGG CCTGGGAGAA 540
GGGGGGGCCG CTCGACCCCC TGGGATACCT TGGGGAGCCT GAACACCTGG GACCCCCCCC 600
AGAACCAGGT AACGGGGAGC CGCGAGGACG TCTGTAAAGA GGGAAACCCT CTCCTTGCAG 660
CAGGGCAGGA CGCCTGAGTC TCTGGAGGGG TAGAGCTGGG GATGGACGTT TGGGTCTTGG 720
GAAGGGCACT GGGAAGAAGA CTGGGGCGGA GGTCATGGGT CCCCTAGAAG AGAGAACGGC 780
GGGGAAGGAG GAAGAACTGG GAGGCAGATG TCTCAGGTTC CAAATGTCCA GAGGGGCCTG 840
AAAGGACTCC CCGTTCCCCT TGGGCTGGGA TTCCCCTTCC CGACTCCAGG GCGGGGCGGG 900
GCGGGGCGCG GCGGTCCTTA CTGAAGGGCA GGACTAAAGG GCAGAGTTTG CAGACAGGTC 960
AATGCCATGG CCCAGTAAGG TCAGATGTGG TCAGACTTGG GTGTGTCCCG GTCCCAGGAC 1020
TACTTTAAGT CTCCCTCCAG TTCTCTGCAC GGGTGAGGTG TAGAAGCCTC AGCCTGACCT 1080
TCCCACCAGC GGCCCCGAGA GCTTCCCAGC GGTAGCCTTC GCCTTCTTCC CACCACCCCC 1140
CTGCGCCTCC CTTTCACTCC GTCTCGCCCC 1170