EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-32714

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr17:5011570-5012220

Target genes

Number: 12
Name	Ensembl ID

GP1BA	ENSG00000185245
RNF167	ENSG00000108523
SLC25A11	ENSG00000108528
ENO3	ENSG00000108515
PFN1	ENSG00000108518
SPAG7	ENSG00000091640
INCA1	ENSG00000196388
KIF1C	ENSG00000129250
AC109333.10	ENSG00000227495
AC012146.7	ENSG00000234327
USP6	ENSG00000129204
ZNF232	ENSG00000167840

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA2	MA0036.3	chr17:5012083-5012094	AGAGATAAGAA	-	6.32
Gata1	MA0035.3	chr17:5012083-5012094	AGAGATAAGAA	-	6.32
Gata4	MA0482.1	chr17:5012082-5012093	AAGAGATAAGA	-	6.02
ZNF263	MA0528.1	chr17:5012181-5012202	TCTTTCTCCTCTCCCTCCCCA	-	7.06

Enhancer Sequence

GCCCCTGAGG CTCTAAGTCT AGTGTTCGCC GCTGGGAGAG AGGAGAGGTT GTTTGCAGGT 60
ATGTATGCAG GCCAAGAAGG AAGTTTCTGT AGTGAATCTG AAGGGTAGAA GGTGAGGGCA 120
CACATAAGAG AGTTTCAGAT AGGGCTGTTT ACATGAGGAA GAGGTGGTAA AGGTGATGAC 180
AGGCTGTATC TCACATAGGA GTGCTTTATG GCTTAAAAAG TGTTTTGCGA GGCCTCAGCG 240
AGTTTAAAAA AAAAAAAAGG ATCTCAAGGC TGGCCTCTAG CTCAGGGCAG AGTTATTATA 300
GACTAGGAGT TAAGTGCAGT GGAGATGATA AGGCATAAAT GAATGAGCTA TTTCCTGGTC 360
CTGATTTAGG GCTCTCTAAA GTTAAGAGAT GCTGGCCAGG CTTTATATCC AGATAAGACC 420
CAAGTTGAGC TTAATCCTCA GAGCTATCTT ATGAGGTAGT TTATTCTTAC TCCTAATTTT 480
ATGAGTGATG AAACAGGCAA AGTCTCTCAC CTAAGAGATA AGAATAGTAA GGCTGTGATG 540
ATACCAAACA TTTAAGCACC TACTACTATT TACCCTTTAC AGGTACTAGG TACTGTGCCC 600
TTTATAGTCC CTCTTTCTCC TCTCCCTCCC CACAGAATCC TGCTCCTCAC 650