EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-29542

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr16:3108340-3108410

Target genes

Number: 21
Name	Ensembl ID

PDPK2	ENSG00000205918
ERVK13	ENSG00000260565
KCTD5	ENSG00000167977
SRRM2	ENSG00000167978
TCEB2	ENSG00000103363
FLYWCH2	ENSG00000162076
FLYWCH1	ENSG00000059122
LA16c	ENSG00000262482
KREMEN2	ENSG00000131650
PAQR4	ENSG00000162073
CLDN9	ENSG00000213937
TNFRSF12A	ENSG00000006327
CLDN6	ENSG00000184697
THOC6	ENSG00000131652
HCFC1R1	ENSG00000103145
RP11	ENSG00000205890
CCDC64B	ENSG00000162069
MMP25	ENSG00000008516
IL32	ENSG00000008517
U1	ENSG00000252561
AJ003147.9	ENSG00000262668

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_17043	chr16:3108243-3110157	CD4p_CD225int_CD127p_Tmem
SE_17590	chr16:3108065-3110496	CD4p_CD25-_CD45RAp_Naive
SE_17911	chr16:3107808-3111050	CD4p_CD25-_CD45ROp_Memory
SE_18962	chr16:3108387-3110478	CD4p_CD25-_Il17-_PMAstim_Th
SE_19506	chr16:3108124-3110258	CD4p_CD25-_Il17p_PMAstim_Th17
SE_43131	chr16:3107899-3110709	Lung
SE_50464	chr16:3107938-3110677	Sigmoid_Colon
SE_52886	chr16:3108272-3110688	Small_Intestine
SE_63074	chr16:3107786-3157431	Tonsil

Enhancer Sequence

GGGGCCGGCG GCGGGGCGCG CTGGGGCCGG CGCGGGGAGC CCACCCCTGA CCTCCCGGCC 60
TCCACCCTGC 70