EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-29534

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr16:3023490-3024000

Target genes

Number: 19
Name	Ensembl ID

ATP6V0C	ENSG00000185883
CTD	ENSG00000261093
AC141586.5	ENSG00000215154
PDPK2	ENSG00000205918
ERVK13	ENSG00000260565
KCTD5	ENSG00000167977
SRRM2	ENSG00000167978
TCEB2	ENSG00000103363
LA16c	ENSG00000263280
FLYWCH2	ENSG00000162076
FLYWCH1	ENSG00000059122
KREMEN2	ENSG00000131650
PAQR4	ENSG00000162073
PKMYT1	ENSG00000127564
TNFRSF12A	ENSG00000006327
THOC6	ENSG00000131652
HCFC1R1	ENSG00000103145
IL32	ENSG00000008517
U1	ENSG00000252561

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs886427

chr16

3023605

hg19

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_34566	chr16:3017502-3025680	HCT-116
SE_41897	chr16:3019286-3028492	LNCaP

Enhancer Sequence

TCTGGAACTT CTTGTCTGCT ATCAAGTGCC CCGAGGGATG AGGTGATGTG TTTGTAAGGA 60
AGGGGCTAAC GGCAGAGTCC CCAAGAGCTG TCTGCCCTGA GCGTGTGGTT TCCTAATTAC 120
AGCCTCTCAC TCAAGACACC AGGCCCCAGG GACCAAGGAC TTGTTCCCAG GGCAGGGCTC 180
CCCAGACTCC AGAGGCTTTC TCTTCCCAGA GAAGGGACAA TGTTTTATCC CTGGGCACTG 240
GCAGCCTCCA CTGGGGTCGG GGCTGCGCGG CCAGCCACTC CCTGGGGTGC TGGTGCCCTA 300
AGTGTGAAGC CATGCCCTGA ACGGCCAGTC CACATGCCCA GCTGCATTAA GCCTGGCCAG 360
GCCACACACC CCCAGTCTTG GTCCCCTTCC CCAGGATGTG ATGGGGGCCA GGTTTGTGGG 420
AGTGGTCCCC ATTCACCACG AATCTCCATG GAGCCCCGGT GATATCCCCC ACCTTCCCCC 480
TAGCCCCCCA TACCCTGCAC TTGAACCCAC 510