EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-28280

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr15:75712520-75713910

Target genes

Number: 18
Name	Ensembl ID

SCAMP2	ENSG00000140497
MPI	ENSG00000178802
COX5A	ENSG00000178741
RPL36AP45	ENSG00000240366
C15orf39	ENSG00000167173
ANP32BP1	ENSG00000259790
COMMD4	ENSG00000140365
NEIL1	ENSG00000140398
RP11	ENSG00000260591
MAN2C1	ENSG00000140400
RPL13P4	ENSG00000241890
CTD	ENSG00000261714
SIN3A	ENSG00000169375
PTPN9	ENSG00000169410
SNUPN	ENSG00000169371
SNX33	ENSG00000173548
IMP3	ENSG00000177971
CSPG4	ENSG00000173546

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr15:75713293-75713311	CTTTCCTTGTTTCCTTGC	-	6.04
Nr2f6(var.2)	MA0728.1	chr15:75712946-75712961	TGAACTCCTGACCTC	-	6.22

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH15I075420

chr15

75713221

75713370

Enhancer Sequence

CACAAGCAAC TGTAAAGATA ACCTGCTAAA TATGTACCAA ATATCACTGC TGCTGACATT 60
CAATAACTAA ATAACACCAA ACATGCCTCA AATCGTTCAA ATCCCTTCTT GTCACCACCA 120
ATCTACCAAA GACAAAAAAC AAAAAAAAAA GACAATGTTG AGGCTTGAAA TAATGTGTAA 180
GCATTCTCAC TGAACATTTC TTTTTTTTTG TTTGTTTTTT CTGAGACGGA GTTTCACTCT 240
TGTCGCCCAG ACTCGAGTGC AGTGGTATGA TCTTGGCTTA CTGCAATCTC TGCCTCCTGG 300
GTTCCAACGA TTCTCCTGCC TCAGCCTCCT GAGTAGCTGG GATTATTACA GGCATGCGCC 360
ACCATGCCTG GCTCATTTTG TATTTTTAGT AGAGGCATGG TTTCATCACA TTTGTCAGGC 420
TGGTCTTGAA CTCCTGACCT CAGGTGATCC ACCCACCTCG GCCTCCCAAA GTGCTGGGAT 480
TACAGGTGTA AGCCACCATG CCCGGCCTAC ATTATTATAG AATATAAATG ATTTATTGAA 540
GTTGATTCAA ATGCTTGTAA TGCATTTTAA GACTGATCCA AAAATGACAG GCAATGTGGG 600
AATACTGAGT TAAATTACAT GGAGGTACAA GAAGCATTTT ACCTCTCCTC ATCAGAAAGG 660
AAATTCAACA AGTTATTTTA TGCAGGAATA TAGTCAAGAG CTTGTGACTA AAAGAACACA 720
ACAAGAAATC CTAACTCTAT CTATGACTCA CTCTATAACC CCAAATCCAA AACCTTTCCT 780
TGTTTCCTTG CCAGTTTCCA TAAAGCAAAC AAAACATAAT CCATATACTT ATACCAAAGA 840
GTCCTGTGAG GAAGGTGGGT AAAAACTGGT GTTGTGCTTT GATAGGGTTG ATTGAAAAAG 900
GCTATAGAAA TACATATGTT TTTGTTAGTT TAATAAGCAA GTTTATAAGC TATTTTGCAA 960
CATTAAAGTA TAACTACTGA ATATACAGTG TTAATACAGA ATTAAATCAC GCACAACCAA 1020
GTTTTAAAAA AAATATTTTC AGGACTTAGT AAAGTGCTAA GCCCGCAGCA ATAATACATT 1080
TTGGTACACA GCCATCACTC TACAACAGAC TGAAAATGTT TTAAAGGAAA CATCAATATT 1140
CCTTATACAC ATTTTCCCAA AGACAGAATC CAGAGTGAAG CTTCAGGCCT AAAAAACCTG 1200
TACTCTCTTT AAAAGGCTAT GCATTAGTCA ATACTATGTA AGCCAATATA GAGAGTAAAT 1260
TTTACAAAAT TACTCTAAAT CACATAGCTT TGCTGTACTT TATAATATTT ATGTAGCATT 1320
TAATACTCTT AGGCCAATAT TAAACAAGTT CCCAAGAATC CACACCAACG AGGGCAGGGA 1380
TCAAGAAGAA 1390