EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-23627

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr14:24564060-24565260

Target genes

Number: 36
Name	Ensembl ID

DHRS4	ENSG00000157326
DHRS4L2	ENSG00000187630
C14orf167	ENSG00000215256
RP11	ENSG00000225766
LRRC16B	ENSG00000186648
PCK2	ENSG00000100889
DCAF11	ENSG00000100897
NRL	ENSG00000129535
FITM1	ENSG00000139914
PSME1	ENSG00000092010
FAM158A	ENSG00000100908
RNF31	ENSG00000092098
PSME2	ENSG00000100911
IRF9	ENSG00000213928
REC8	ENSG00000100918
IPO4	ENSG00000196497
TSSK4	ENSG00000139908
TM9SF1	ENSG00000100926
CHMP4A	ENSG00000254505
AL136419.6	ENSG00000260669
MDP1	ENSG00000213920
NEDD8	ENSG00000255526
GMPR2	ENSG00000100938
TINF2	ENSG00000092330
TGM1	ENSG00000092295
RABGGTA	ENSG00000100949
DHRS1	ENSG00000157379
C14orf21	ENSG00000196943
LTB4R2	ENSG00000213906
CIDEB	ENSG00000136305
LTB4R	ENSG00000213903
NFATC4	ENSG00000100968
NYNRIN	ENSG00000205978
KHNYN	ENSG00000100441
CBLN3	ENSG00000139899
SDR39U1	ENSG00000100445

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr14:24564193-24564211	GGAGGGAGGCAAGCAAGG	+	6.32
GLI2	MA0734.2	chr14:24564412-24564427	CCTTGTGGGTGGTCT	-	6.48
KLF4	MA0039.3	chr14:24564458-24564469	AGAGGGTGTGG	-	6.02
NFYA	MA0060.3	chr14:24564949-24564960	GGCCAATCAGA	+	6.02
USF1	MA0093.2	chr14:24564833-24564844	GGTCACGTGGT	-	6.32
USF2	MA0526.2	chr14:24564830-24564846	CGGGGTCACGTGGTCC	+	7.77

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_28386	chr14:24559518-24566199	Fetal_Intestine
SE_29515	chr14:24559630-24566262	Fetal_Intestine_Large

Enhancer Sequence

GAGCCCCGGG AGACTAAGCT CAGAGCCCCC TAAAGAAGGT GGAAGGTTAA ATATCCATTC 60
CCGGCCTCTC CCGGACTGGA AGGACTGGAA CCTGGCGGGA AGTCCAGAGC AGCCCGAGGG 120
ACCTGGGCCC AGGGGAGGGA GGCAAGCAAG GTGGGAGGAG GGCGCCAAGT TGCCTTCGTT 180
TCTTACATAG CTGGCTTCTT CCTCCGTCCA GGCCTGGAGC CCCCAGGCTC GTCCTGTTTG 240
TCTGCCTGTC CTCTTAGTCT CCTATTTATT CTCTGAGGCC TCTCTTCTCA GCTTTTGTCC 300
CAGAGTCGGA AGTGACCCAC ATCTGTCGCA CAGCCCGTTC CACTTGGGCA GCCCTTGTGG 360
GTGGTCTCTG AAGGAAACGT CCCACTTAGA GGGCTGCAAG AGGGTGTGGG GGCTTCACAA 420
GAGATAACGT GAGCCAGGCT CCAGGGAGAG AGAGGCTGTC CTCAAGACTG TGTGCTTGAA 480
AACTGATGCT CACGGAGAAC TTCCCTCTGA GGCAGGAACA GACCCAGGTC CCAGTAGCCC 540
TCCTCCCCTG CCCCTGGGGC CACACTGATC ATCTATCCTG CTTTAGCGGA AACCACCCCA 600
GCTTCTACCC CAGACAGACT CAAGCTCCCG TATCCATGCT CTGAGCTTTC TTCCTTCCCC 660
AGGCTAACAC CCTCTGAGTC TGAGCTGCCA GCAAGCTGCT GTTCCACCCT CCCACCAACA 720
CCAAAGCTCT CTAGGCATGT GGCCTCTAGG AAGAAGAGCC AGGGGAAGCA CGGGGTCACG 780
TGGTCCTGGG TGTGGGGGCA GTTTCTGATG GGCGAGGCCT TGATAGAGGA GGAGAGTAAC 840
ATCCCCTTCA TGGTCTTTGC TCTCTCGGGT TTACTCCACC TTGAGTCCAG GCCAATCAGA 900
GCAGACGTTG CTTCTCTGTC TCCCAGGGCC ATGAGAGGAC AGACAACAGG ACGCTGACCT 960
CCTGAGAATT AAGCCCATGA ACCCCAGCCA GTGACACTCA TTCCCCAGTG GTCAACCTTC 1020
CGCAGAGTTC AGAAATACTT ACCCGAGGGC AACATTTTAT GCAACCATTG TTGGTCCAAG 1080
TGGGCAGCAG CAGATCAGGG CCTGGAAGCC CAGCATCCAG TCACCTATTC TCTGTGCAAG 1140
AGCCCTCATC TAGAAACCTG GCACTGGAAA GACTGTGACC TTTGCTTGGG GCTTTCATAG 1200